Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10810 and 10811 are separated by 538 nucleotides10811 and 10812 are separated by 351 nucleotides10812 and 10813 are separated by 1096 nucleotides10813 and 10814 are separated by 367 nucleotides mRNA_2442: 10810 - HMMPfam-ACT domain-PF13840,SUPERFAMILY--SSF55021, at 140,857 to 142,808 10810 mRNA_2443: 10811 - HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113, at 143,347 to 145,508 10811 mRNA_2444: 10812 - KOG4505 Na+/H+ antiporter, at 145,860 to 150,269 10812 mRNA_2445: 10813 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 151,366 to 153,133 10813 mRNA_2446: 10814 - K11396 YNG2, EAF4 chromatin modification-related protein YNG2, at 153,501 to 155,365 10814
Group Condition mRNA_2442 mRNA_2443 mRNA_2444 mRNA_2445 mRNA_2446
10810 10811 10812 10813 10814
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.5 -4.1 -0.0 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -1.4 -0.9 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.2 -2.3 +0.0 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.0 -1.9 -0.1 N.D.
growth on oleic acid YNB Oleic Acid -0.8 -1.0 -0.2 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.8 +0.2 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 +0.0 -0.5 -0.6 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.7 +0.2 -0.3 N.D.
growth on oleic acid YNB Glucose -0.5 -0.2 -0.1 -0.0 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.1 +0.1 +0.0 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.0 +0.1 -0.5 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 +0.0 -1.1 +0.4 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.4 -0.3 -0.5 +0.1 N.D.
auxotrophy Dropout Complete -0.2 -0.2 +0.2 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.4 -0.2 +0.6 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.1 -0.1 +0.4 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.1 -0.3 N.D.
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.1 +0.4 +0.1 N.D.
growth on ypd YPD -0.1 -0.4 +0.3 +0.7 N.D.
auxotrophy YNB Glucose -0.0 +0.1 +0.4 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.0 -0.1 +0.5 N.D.
remove
mRNA_2442
plot
remove
mRNA_2443
plot
remove
mRNA_2444
remove
mRNA_2445
plot
remove
mRNA_2446
plot