Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10811 and 10812 are separated by 351 nucleotides10812 and 10813 are separated by 1096 nucleotides10813 and 10814 are separated by 367 nucleotides10814 and 10815 are separated by 266 nucleotides mRNA_2443: 10811 - HMMPfam-Peroxidase-PF00141,PRINTS-Haem peroxidase superfamily signature-PR00458,PRINTS-Plant ascorbate peroxidase signature-PR00459,ProSitePatterns-Peroxidases proximal heme-ligand signature.-PS00435,ProSitePatterns-Peroxidases active site signature.-PS00436,ProSiteProfiles-Plant heme peroxidase family profile.-PS50873,SUPERFAMILY--SSF48113, at 143,347 to 145,508 10811 mRNA_2444: 10812 - KOG4505 Na+/H+ antiporter, at 145,860 to 150,269 10812 mRNA_2445: 10813 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 151,366 to 153,133 10813 mRNA_2446: 10814 - K11396 YNG2, EAF4 chromatin modification-related protein YNG2, at 153,501 to 155,365 10814 mRNA_2447: 10815 - Hypothetical Protein, at 155,632 to 156,162 10815
Group Condition mRNA_2443 mRNA_2444 mRNA_2445 mRNA_2446 mRNA_2447
10811 10812 10813 10814 10815
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -4.1 -0.0 N.D. +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -2.3 +0.0 N.D. -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 -0.9 -0.1 N.D. +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -1.9 -0.1 N.D. -0.0
growth on oleic acid YNB Oleic Acid -1.0 -0.2 +0.1 N.D. +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.5 -0.6 N.D. +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 +0.2 -0.2 N.D. -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 +0.2 -0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.5 +0.1 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -1.1 +0.4 N.D. +0.2
ypd buoyancy 40 hrs High Buoyancy +0.0 +0.1 -0.5 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.1 +0.0 N.D. -0.2
growth on oleic acid YNB Glucose -0.2 -0.1 -0.0 N.D. +0.2
auxotrophy Dropout Complete -0.2 +0.2 -0.1 N.D. -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.3 N.D. +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 +0.4 N.D. -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.4 +0.1 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.1 +0.5 N.D. +0.0
growth on ricinoleic acid YNB Glucose -0.2 +0.6 -0.1 N.D. +0.1
growth on ypd YPD -0.4 +0.3 +0.7 N.D. -0.1
auxotrophy YNB Glucose +0.1 +0.4 +0.1 N.D. -0.1
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