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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10812 and 10813 are separated by 1096 nucleotides
10813 and 10814 are separated by 367 nucleotides
10814 and 10815 are separated by 266 nucleotides
10815 and 10816 are separated by 872 nucleotides
mRNA_2444: 10812 - KOG4505 Na+/H+ antiporter, at 145,860 to 150,269
10812
mRNA_2445: 10813 - HMMPfam-Protein of unknown function (DUF3533)-PF12051, at 151,366 to 153,133
10813
mRNA_2446: 10814 - K11396 YNG2, EAF4 chromatin modification-related protein YNG2, at 153,501 to 155,365
10814
mRNA_2447: 10815 - Hypothetical Protein, at 155,632 to 156,162
10815
mRNA_2448: 10816 - Hypothetical Protein, at 157,035 to 159,573
10816
Group
Condition
mRNA
_2444
mRNA
_2445
mRNA
_2446
mRNA
_2447
mRNA
_2448
10812
10813
10814
10815
10816
facs on lipid accumulation
Sorted Low BODIPY Gate
-4.1
-0.0
N.D.
+0.2
-0.5
facs on lipid accumulation
Sorted High BODIPY Gate
-2.3
+0.0
N.D.
-0.0
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-1.9
-0.1
N.D.
-0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.5
-0.6
N.D.
+0.1
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
-0.1
N.D.
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-1.1
+0.4
N.D.
+0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.5
N.D.
-0.0
-0.1
auxotrophy
Dropout Complete
+0.2
-0.1
N.D.
-0.1
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
+0.1
N.D.
-0.0
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.2
-0.2
N.D.
-0.0
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.0
N.D.
-0.2
-0.2
growth on oleic acid
YNB Glucose
-0.1
-0.0
N.D.
+0.2
-0.4
ypd buoyancy
40 hrs Median Buoyancy
+0.1
-0.3
N.D.
+0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.2
+0.1
N.D.
+0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
+0.2
-0.3
N.D.
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
+0.4
N.D.
-0.1
-0.1
auxotrophy
YNB Glucose
+0.4
+0.1
N.D.
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.4
+0.1
N.D.
-0.0
-0.1
growth on ricinoleic acid
YNB Glucose
+0.6
-0.1
N.D.
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
+0.5
N.D.
+0.0
+0.1
growth on ypd
YPD
+0.3
+0.7
N.D.
-0.1
-0.1
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