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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10814 and 10815 are separated by 266 nucleotides
10815 and 10816 are separated by 872 nucleotides
10816 and 10817 are separated by 376 nucleotides
10817 and 10818 are separated by 94 nucleotides
mRNA_2446: 10814 - K11396 YNG2, EAF4 chromatin modification-related protein YNG2, at 153,501 to 155,365
10814
mRNA_2447: 10815 - Hypothetical Protein, at 155,632 to 156,162
10815
mRNA_2448: 10816 - Hypothetical Protein, at 157,035 to 159,573
10816
mRNA_2449: 10817 - KOG1343 Histone deacetylase complex, catalytic component HDA1, at 159,950 to 161,445
10817
mRNA_2450: 10818 - KOG3037 Cell membrane glycoprotein, at 161,540 to 163,035
10818
Group
Condition
mRNA
_2446
mRNA
_2447
mRNA
_2448
mRNA
_2449
mRNA
_2450
10814
10815
10816
10817
10818
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.1
-0.3
-0.5
-0.8
auxotrophy
Dropout Complete
N.D.
-0.1
-0.5
-0.2
-0.4
auxotrophy
YNB Glucose 75mM Arginine
N.D.
-0.2
-0.2
-0.0
-0.7
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.0
-0.2
-0.0
-0.8
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
-0.3
-0.0
-0.7
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.0
-0.1
-0.1
-0.6
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-0.0
-0.4
-0.5
+0.2
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-0.0
-0.2
-0.0
-0.4
auxotrophy
YNB Glucose
N.D.
-0.1
-0.2
+0.1
-0.4
growth on oleic acid
YNB Glucose
N.D.
+0.2
-0.4
+0.0
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
+0.2
-0.5
-0.3
+0.2
growth on oleic acid
YNB Oleic Acid
N.D.
+0.1
-0.2
+0.1
-0.5
growth on ypd
YPD
N.D.
-0.1
-0.1
-0.6
+0.6
ypd buoyancy
40 hrs Low Buoyancy
N.D.
+0.1
-0.4
+0.2
+0.0
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.0
-0.1
-0.1
+0.3
ypd buoyancy
40 hrs Median Buoyancy
N.D.
+0.1
-0.2
+0.2
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.2
-0.3
+0.4
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
-0.1
-0.1
+0.5
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
+0.0
+0.1
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
-0.0
+0.0
+0.8
+0.0
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
+0.1
-0.1
+1.4
+0.4
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