Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10815 and 10816 are separated by 872 nucleotides10816 and 10817 are separated by 376 nucleotides10817 and 10818 are separated by 94 nucleotides10818 and 10819 are separated by 352 nucleotides mRNA_2447: 10815 - Hypothetical Protein, at 155,632 to 156,162 10815 mRNA_2448: 10816 - Hypothetical Protein, at 157,035 to 159,573 10816 mRNA_2449: 10817 - KOG1343 Histone deacetylase complex, catalytic component HDA1, at 159,950 to 161,445 10817 mRNA_2450: 10818 - KOG3037 Cell membrane glycoprotein, at 161,540 to 163,035 10818 mRNA_2451: 10819 - Hypothetical Protein, at 163,388 to 164,949 10819
Group Condition mRNA_2447 mRNA_2448 mRNA_2449 mRNA_2450 mRNA_2451
10815 10816 10817 10818 10819
growth on ricinoleic acid YNB Ricinoleic Acid +0.1 -0.3 -0.5 -0.8 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2 -0.0 -0.8 -0.6
growth on ricinoleic acid YNB Glucose +0.1 -0.3 -0.0 -0.7 -0.6
auxotrophy Dropout Complete -0.1 -0.5 -0.2 -0.4 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 -0.0 -0.7 -0.2
growth on oleic acid YNB Oleic Acid +0.1 -0.2 +0.1 -0.5 -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.4 -0.5 +0.2 -0.3
growth on oleic acid YNB Glucose +0.2 -0.4 +0.0 -0.4 -0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.2 -0.0 -0.4 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.5 -0.3 +0.2 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 -0.1 -0.6 +0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.4 +0.2 +0.0 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 +0.2 -0.0 -0.7
auxotrophy YNB Glucose -0.1 -0.2 +0.1 -0.4 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.1 -0.1 +0.3 -0.4
growth on ypd YPD -0.1 -0.1 -0.6 +0.6 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 -0.3 +0.4 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1 +0.5 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.0 +0.8 +0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 +0.1 +0.3 +0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 +1.4 +0.4 +0.5
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