Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10817 and 10818 are separated by 94 nucleotides10818 and 10819 are separated by 352 nucleotides10819 and 10820 are separated by 259 nucleotides10820 and 10821 are separated by 468 nucleotides mRNA_2449: 10817 - KOG1343 Histone deacetylase complex, catalytic component HDA1, at 159,950 to 161,445 10817 mRNA_2450: 10818 - KOG3037 Cell membrane glycoprotein, at 161,540 to 163,035 10818 mRNA_2451: 10819 - Hypothetical Protein, at 163,388 to 164,949 10819 mRNA_2452: 10820 - HMMPfam-Ribonuclease H2 non-catalytic subunit (Ylr154p-like)-PF08615, at 165,209 to 166,286 10820 mRNA_2453: 10821 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 166,755 to 168,701 10821
Group Condition mRNA_2449 mRNA_2450 mRNA_2451 mRNA_2452 mRNA_2453
10817 10818 10819 10820 10821
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.8 -0.6 -0.2 -0.4
growth on ricinoleic acid YNB Glucose -0.0 -0.7 -0.6 +0.3 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.4 -0.3 -0.4 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.8 -0.6 +0.6 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.7 -0.2 +0.2 -0.1
auxotrophy Dropout Complete -0.2 -0.4 -0.2 -0.3 +0.3
growth on oleic acid YNB Glucose +0.0 -0.4 -0.5 +0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.4 -0.0 -0.2 -0.8 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 +0.2 -0.3 -0.5 +0.4
growth on oleic acid YNB Oleic Acid +0.1 -0.5 -0.7 +0.5 +0.2
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.0 -0.4 +0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 -0.0 -0.7 +0.5 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.6 +0.1 +0.4 +0.1
growth on ypd YPD -0.6 +0.6 +0.2 -0.3 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.2 -0.3 +0.7 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.3 -0.4 +0.3 +0.1
auxotrophy YNB Glucose +0.1 -0.4 +0.1 +0.4 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.8 +0.0 -0.1 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.3 +0.2 +0.2 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 +0.2 +0.1 +0.4 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +1.4 +0.4 +0.5 -0.3 -0.1
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