Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10818 and 10819 are separated by 352 nucleotides10819 and 10820 are separated by 259 nucleotides10820 and 10821 are separated by 468 nucleotides10821 and 10822 are separated by 985 nucleotides mRNA_2450: 10818 - KOG3037 Cell membrane glycoprotein, at 161,540 to 163,035 10818 mRNA_2451: 10819 - Hypothetical Protein, at 163,388 to 164,949 10819 mRNA_2452: 10820 - HMMPfam-Ribonuclease H2 non-catalytic subunit (Ylr154p-like)-PF08615, at 165,209 to 166,286 10820 mRNA_2453: 10821 - HMMPfam-Fungal cellulose binding domain-PF00734,ProSitePatterns-CBM1 (carbohydrate binding type-1) domain signature.-PS00562,ProSiteProfiles-CBM1 (carbohydrate binding type-1) domain profile.-PS51164,SMART-Fungal-type cellulose-binding domain-SM00236,SUPERFAMILY--SSF57180, at 166,755 to 168,701 10821 mRNA_2454: 10822 - K12823 DDX5, DBP2 ATP-dependent RNA helicase DDX5/DBP2, at 169,687 to 172,594 10822
Group Condition mRNA_2450 mRNA_2451 mRNA_2452 mRNA_2453 mRNA_2454
10818 10819 10820 10821 10822
growth on ricinoleic acid YNB Ricinoleic Acid -0.8 -0.6 -0.2 -0.4 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 -0.2 -0.8 -0.1 N.D.
growth on ricinoleic acid YNB Glucose -0.7 -0.6 +0.3 -0.2 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.3 -0.4 +0.1 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 -0.6 +0.6 -0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.7 -0.2 +0.2 -0.1 N.D.
growth on oleic acid YNB Glucose -0.4 -0.5 +0.2 -0.1 N.D.
auxotrophy Dropout Complete -0.4 -0.2 -0.3 +0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.5 -0.7 +0.5 +0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy +0.0 -0.4 +0.2 -0.2 N.D.
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.7 +0.5 -0.1 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.3 -0.5 +0.4 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.6 +0.1 +0.4 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.1 +0.3 -0.1 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.3 -0.4 +0.3 +0.1 N.D.
auxotrophy YNB Glucose -0.4 +0.1 +0.4 +0.3 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 -0.3 +0.7 -0.1 N.D.
growth on ypd YPD +0.6 +0.2 -0.3 +0.1 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.5 -0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.2 +0.2 -0.0 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 +0.1 +0.4 -0.0 N.D.
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