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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10831 and 10832 are separated by 775 nucleotides
10832 and 10833 are separated by 1919 nucleotides
10833 and 10834 are separated by 450 nucleotides
10834 and 10835 are separated by 1264 nucleotides
mRNA_2463: 10831 - Hypothetical Protein, at 200,051 to 202,030
10831
mRNA_2464: 10832 - Hypothetical Protein, at 202,806 to 204,474
10832
mRNA_2465: 10833 - K09291 TPR, MLP1, MLP2 nucleoprotein TPR, at 206,394 to 209,572
10833
mRNA_2466: 10834 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 210,023 to 215,249
10834
mRNA_2467: 10835 - Hypothetical Protein, at 216,514 to 218,202
10835
Group
Condition
mRNA
_2463
mRNA
_2464
mRNA
_2465
mRNA
_2466
mRNA
_2467
10831
10832
10833
10834
10835
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
N.D.
N.D.
+0.1
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
N.D.
N.D.
-0.1
-0.7
growth on ricinoleic acid
YNB Glucose
-0.2
N.D.
N.D.
+0.1
-0.7
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
N.D.
N.D.
+0.0
-0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
N.D.
N.D.
+0.2
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.1
N.D.
N.D.
+0.4
-0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
N.D.
N.D.
-0.2
-0.2
growth on oleic acid
YNB Glucose
-0.3
N.D.
N.D.
-0.1
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.5
N.D.
N.D.
+0.1
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.0
N.D.
N.D.
-0.0
-0.2
auxotrophy
YNB Glucose
-0.2
N.D.
N.D.
+0.1
-0.1
auxotrophy
Dropout Complete
-0.1
N.D.
N.D.
+0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.3
N.D.
N.D.
+0.1
+0.0
growth on oleic acid
YNB Oleic Acid
-0.3
N.D.
N.D.
+0.3
-0.1
growth on ypd
YPD
-0.0
N.D.
N.D.
-0.1
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.1
N.D.
N.D.
-0.0
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
N.D.
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
N.D.
N.D.
+0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.2
N.D.
N.D.
+0.2
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
N.D.
N.D.
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
N.D.
N.D.
-0.1
+0.4
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