Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10832 and 10833 are separated by 1919 nucleotides
10833 and 10834 are separated by 450 nucleotides
10834 and 10835 are separated by 1264 nucleotides
10835 and 10836 are separated by 1236 nucleotides
mRNA_2464: 10832 - Hypothetical Protein, at 202,806 to 204,474
10832
mRNA_2465: 10833 - K09291 TPR, MLP1, MLP2 nucleoprotein TPR, at 206,394 to 209,572
10833
mRNA_2466: 10834 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 210,023 to 215,249
10834
mRNA_2467: 10835 - Hypothetical Protein, at 216,514 to 218,202
10835
mRNA_2468: 10836 - HMMPfam-Protein of unknown function (DUF3605)-PF12239, at 219,439 to 220,603
10836
Group
Condition
mRNA
_2464
mRNA
_2465
mRNA
_2466
mRNA
_2467
mRNA
_2468
10832
10833
10834
10835
10836
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.1
-0.7
-1.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
+0.1
-0.7
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
-0.0
-0.2
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
+0.4
-0.7
+0.0
growth on ypd
YPD
N.D.
N.D.
-0.1
+0.1
-0.1
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
+0.1
-0.7
+0.5
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
+0.0
-0.3
+0.2
auxotrophy
Dropout Complete
N.D.
N.D.
+0.1
-0.1
-0.0
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
+0.3
-0.1
-0.2
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
+0.1
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
-0.2
-0.2
+0.5
growth on oleic acid
YNB Glucose
N.D.
N.D.
-0.1
+0.0
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
+0.2
-0.5
+0.4
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
+0.2
+0.2
-0.1
auxotrophy
YNB Glucose
N.D.
N.D.
+0.1
-0.1
+0.4
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
-0.0
+0.1
+0.4
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
-0.0
-0.1
+0.6
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
+0.1
+0.1
+0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
-0.1
+0.4
+0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
+0.1
+0.0
+0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
+0.1
+0.2
+0.4
remove
mRNA_2464
plot
remove
mRNA_2465
plot
remove
mRNA_2466
remove
mRNA_2467
plot
remove
mRNA_2468
plot