Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10838 and 10839 are separated by 2047 nucleotides10839 and 10840 are separated by 513 nucleotides10840 and 10841 are separated by 469 nucleotides10841 and 10842 are separated by 699 nucleotides mRNA_2470: 10838 - K06659 CLB3_4 G2/mitotic-specific cyclin 3/4, at 224,133 to 225,151 10838 mRNA_2471: 10839 - K13104 ZNF830, CCDC16 zinc finger protein 830, at 227,199 to 228,171 10839 mRNA_2472: 10840 - K07836 RAP1B Ras-related protein Rap-1B, at 228,685 to 229,666 10840 mRNA_2473: 10841 - K01610 E4.1.1.49, pckA phosphoenolpyruvate carboxykinase (ATP), at 230,136 to 233,558 10841 mRNA_2474: 10842 - KOG0603 Ribosomal protein S6 kinase, at 234,258 to 235,956 10842
Group Condition mRNA_2470 mRNA_2471 mRNA_2472 mRNA_2473 mRNA_2474
10838 10839 10840 10841 10842
growth on oleic acid YNB Oleic Acid N.D. -0.0 N.D. -0.8 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.2 N.D. -0.8 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 N.D. -1.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.7 N.D. -0.1 +0.0
growth on oleic acid YNB Glucose N.D. -0.3 N.D. -0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.6 N.D. +0.0 -0.2
auxotrophy Dropout Complete N.D. -0.2 N.D. -0.3 -0.1
growth on ypd YPD N.D. -0.0 N.D. -0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.3 N.D. -0.2 +0.0
growth on ricinoleic acid YNB Glucose N.D. -0.2 N.D. -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. +0.2 N.D. -0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.5 N.D. -0.3 +0.5
auxotrophy YNB Glucose 75mM Methionine N.D. +0.2 N.D. -0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.0 N.D. -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 N.D. +0.0 +0.0
ypd buoyancy 40 hrs High Buoyancy N.D. -0.3 N.D. +0.1 +0.2
facs on lipid accumulation Sorted No BODIPY Gate N.D. -0.2 N.D. +0.1 +0.1
auxotrophy YNB Glucose N.D. +0.2 N.D. -0.1 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. -0.3 N.D. +0.1 +0.5
facs on lipid accumulation Sorted High BODIPY Gate N.D. -0.0 N.D. +0.2 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.1 N.D. +0.2 +0.2
remove
mRNA_2470
plot		 remove
mRNA_2471
plot		 remove
mRNA_2472		 remove
mRNA_2473
plot		 remove
mRNA_2474
plot