Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10840 and 10841 are separated by 469 nucleotides10841 and 10842 are separated by 699 nucleotides10842 and 10843 are separated by 321 nucleotides10843 and 10844 are separated by 1578 nucleotides mRNA_2472: 10840 - K07836 RAP1B Ras-related protein Rap-1B, at 228,685 to 229,666 10840 mRNA_2473: 10841 - K01610 E4.1.1.49, pckA phosphoenolpyruvate carboxykinase (ATP), at 230,136 to 233,558 10841 mRNA_2474: 10842 - KOG0603 Ribosomal protein S6 kinase, at 234,258 to 235,956 10842 mRNA_2475: 10843 - BLAST CAMK protein kinase [Microbotryum lychnidis-dioicae p..., at 236,278 to 238,719 10843 mRNA_2476: 10844 - KOG0673 Thymidylate synthase, at 240,298 to 241,620 10844
Group Condition mRNA_2472 mRNA_2473 mRNA_2474 mRNA_2475 mRNA_2476
10840 10841 10842 10843 10844
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. -0.8 -0.3 -0.5 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -1.0 -0.1 -0.4 -0.3
growth on oleic acid YNB Oleic Acid N.D. -0.8 -0.5 -0.4 +0.2
growth on oleic acid YNB Glucose N.D. -0.2 -0.3 -0.2 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation N.D. +0.0 -0.2 +0.4 -1.0
growth on ypd YPD N.D. -0.3 -0.2 -0.1 -0.1
auxotrophy Dropout Complete N.D. -0.3 -0.1 -0.1 -0.2
growth on ricinoleic acid YNB Glucose N.D. -0.0 -0.1 -0.5 +0.1
auxotrophy YNB Glucose 75mM Arginine N.D. -0.1 -0.3 +0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate N.D. +0.2 +0.2 -0.2 -0.5
auxotrophy YNB Glucose 75mM Methionine N.D. -0.1 -0.4 +0.5 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 +0.1 -0.4 +0.2
ypd buoyancy 40 hrs High Buoyancy N.D. +0.1 +0.2 +0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy N.D. -0.1 -0.1 +0.4 -0.1
auxotrophy YNB Glucose N.D. -0.1 +0.1 +0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.2 +0.0 -0.2 +0.7
ypd buoyancy 40 hrs Median Buoyancy N.D. +0.0 +0.0 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. -0.1 +0.0 -0.0 +0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. -0.3 +0.5 -0.3 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.1 +0.5 -0.1 +0.6
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.2 +0.2 +0.4 +0.5
remove
mRNA_2472
plot
remove
mRNA_2473
plot
remove
mRNA_2474
remove
mRNA_2475
plot
remove
mRNA_2476
plot