Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10841 and 10842 are separated by 699 nucleotides10842 and 10843 are separated by 321 nucleotides10843 and 10844 are separated by 1578 nucleotides10844 and 10845 are separated by 417 nucleotides mRNA_2473: 10841 - K01610 E4.1.1.49, pckA phosphoenolpyruvate carboxykinase (ATP), at 230,136 to 233,558 10841 mRNA_2474: 10842 - KOG0603 Ribosomal protein S6 kinase, at 234,258 to 235,956 10842 mRNA_2475: 10843 - BLAST CAMK protein kinase [Microbotryum lychnidis-dioicae p..., at 236,278 to 238,719 10843 mRNA_2476: 10844 - KOG0673 Thymidylate synthase, at 240,298 to 241,620 10844 mRNA_2477: 10845 - K00560 thyA, TYMS thymidylate synthase, at 242,038 to 243,139 10845
Group Condition mRNA_2473 mRNA_2474 mRNA_2475 mRNA_2476 mRNA_2477
10841 10842 10843 10844 10845
growth on ricinoleic acid YNB Methylricinoleic Acid -0.8 -0.3 -0.5 -0.5 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -1.0 -0.1 -0.4 -0.3 N.D.
growth on oleic acid YNB Oleic Acid -0.8 -0.5 -0.4 +0.2 N.D.
growth on oleic acid YNB Glucose -0.2 -0.3 -0.2 -0.2 N.D.
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.2 +0.4 -1.0 N.D.
growth on ypd YPD -0.3 -0.2 -0.1 -0.1 N.D.
auxotrophy Dropout Complete -0.3 -0.1 -0.1 -0.2 N.D.
growth on ricinoleic acid YNB Glucose -0.0 -0.1 -0.5 +0.1 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 +0.3 -0.2 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.2 -0.2 -0.5 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4 +0.5 -0.1 N.D.
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.1 -0.4 +0.2 N.D.
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.2 +0.1 -0.2 N.D.
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 +0.4 -0.1 N.D.
auxotrophy YNB Glucose -0.1 +0.1 +0.4 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.0 -0.2 +0.7 N.D.
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 +0.2 +0.1 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.0 -0.0 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.5 -0.3 +0.6 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.5 -0.1 +0.6 N.D.
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 +0.4 +0.5 N.D.
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