Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10843 and 10844 are separated by 1578 nucleotides10844 and 10845 are separated by 417 nucleotides10845 and 10846 are separated by 380 nucleotides10846 and 10847 are separated by 690 nucleotides mRNA_2475: 10843 - BLAST CAMK protein kinase [Microbotryum lychnidis-dioicae p..., at 236,278 to 238,719 10843 mRNA_2476: 10844 - KOG0673 Thymidylate synthase, at 240,298 to 241,620 10844 mRNA_2477: 10845 - K00560 thyA, TYMS thymidylate synthase, at 242,038 to 243,139 10845 mRNA_2478: 10846 - K20293 COG6, COD2 conserved oligomeric Golgi complex subunit 6, at 243,520 to 246,165 10846 mRNA_2479: 10847 - Hypothetical Protein, at 246,856 to 249,133 10847
Group Condition mRNA_2475 mRNA_2476 mRNA_2477 mRNA_2478 mRNA_2479
10843 10844 10845 10846 10847
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.5 N.D. -0.1 -0.2
growth on ypd YPD -0.1 -0.1 N.D. -0.5 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.2 N.D. -0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 -1.0 N.D. -0.2 +0.6
facs on lipid accumulation Sorted No BODIPY Gate -0.4 +0.2 N.D. -0.3 +0.2
growth on oleic acid YNB Glucose -0.2 -0.2 N.D. +0.2 -0.0
growth on ricinoleic acid YNB Glucose -0.5 +0.1 N.D. +0.4 +0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.5 N.D. +0.9 +0.1
auxotrophy Dropout Complete -0.1 -0.2 N.D. +0.2 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 N.D. -0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.4 +0.2 N.D. +0.4 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.3 N.D. +1.3 -0.2
ypd buoyancy 40 hrs Low Buoyancy +0.4 -0.1 N.D. +0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.3 -0.2 N.D. +0.2 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 +0.6 N.D. +0.5 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.4 +0.5 N.D. -0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.1 N.D. +0.1 +0.2
auxotrophy YNB Glucose +0.4 -0.1 N.D. +0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.6 N.D. +0.2 +0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.7 N.D. +0.7 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 +0.6 N.D. +1.0 +0.1
remove
mRNA_2475
plot
remove
mRNA_2476
plot
remove
mRNA_2477
remove
mRNA_2478
plot
remove
mRNA_2479
plot