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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10846 and 10847 are separated by 690 nucleotides
10847 and 10848 are separated by 77 nucleotides
10848 and 10849 are separated by 329 nucleotides
10849 and 10850 are separated by 1696 nucleotides
mRNA_2478: 10846 - K20293 COG6, COD2 conserved oligomeric Golgi complex subunit 6, at 243,520 to 246,165
10846
mRNA_2479: 10847 - Hypothetical Protein, at 246,856 to 249,133
10847
mRNA_2480: 10848 - KOG0907 Thioredoxin, at 249,211 to 249,707
10848
mRNA_2481: 10849 - Hypothetical Protein, at 250,037 to 250,801
10849
mRNA_2482: 10850 - KOG0712 Molecular chaperone (DnaJ superfamily), at 252,498 to 254,224
10850
Group
Condition
mRNA
_2478
mRNA
_2479
mRNA
_2480
mRNA
_2481
mRNA
_2482
10846
10847
10848
10849
10850
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.2
+0.1
-0.1
-0.5
growth on oleic acid
YNB Oleic Acid
+0.4
-0.1
-0.7
-0.2
-0.1
growth on ypd
YPD
-0.5
+0.1
+0.2
-0.2
-0.2
growth on oleic acid
YNB Glucose
+0.2
-0.0
-0.4
-0.2
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.9
+0.1
-0.6
-0.4
-0.3
growth on ricinoleic acid
YNB Glucose
+0.4
+0.0
-0.4
-0.1
-0.1
auxotrophy
Dropout Complete
+0.2
+0.2
-0.2
-0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.0
+0.4
-0.2
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
-0.1
-0.0
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.3
-0.1
+0.1
+0.2
+0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
+0.6
+0.2
+0.0
-0.3
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.3
+0.1
-0.2
-0.1
ypd buoyancy
40 hrs Low Buoyancy
+0.3
-0.1
-0.0
+0.1
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
+1.3
-0.2
-0.3
+0.0
-0.5
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.7
+0.1
-0.3
-0.1
+0.1
auxotrophy
YNB Glucose
+0.3
+0.2
+0.1
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.2
+0.3
-0.2
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.1
+0.2
+0.4
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.2
+0.1
-0.1
+0.1
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.3
+0.2
+0.6
+0.1
+0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+1.0
+0.1
-0.2
+0.1
+0.1
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