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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10847 and 10848 are separated by 77 nucleotides
10848 and 10849 are separated by 329 nucleotides
10849 and 10850 are separated by 1696 nucleotides
10850 and 10851 are separated by 146 nucleotides
mRNA_2479: 10847 - Hypothetical Protein, at 246,856 to 249,133
10847
mRNA_2480: 10848 - KOG0907 Thioredoxin, at 249,211 to 249,707
10848
mRNA_2481: 10849 - Hypothetical Protein, at 250,037 to 250,801
10849
mRNA_2482: 10850 - KOG0712 Molecular chaperone (DnaJ superfamily), at 252,498 to 254,224
10850
mRNA_2483: 10851 - K17541 SCYL2 SCY1-like protein 2, at 254,371 to 257,459
10851
Group
Condition
mRNA
_2479
mRNA
_2480
mRNA
_2481
mRNA
_2482
mRNA
_2483
10847
10848
10849
10850
10851
growth on oleic acid
YNB Oleic Acid
-0.1
-0.7
-0.2
-0.1
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.3
+0.0
-0.5
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.1
-0.6
-0.4
-0.3
+0.1
auxotrophy
Dropout Complete
+0.2
-0.2
-0.3
-0.1
-0.4
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
+0.1
-0.1
-0.5
-0.1
growth on ricinoleic acid
YNB Glucose
+0.0
-0.4
-0.1
-0.1
-0.0
growth on oleic acid
YNB Glucose
-0.0
-0.4
-0.2
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.3
-0.1
+0.1
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
-0.0
-0.3
-0.1
-0.0
growth on ypd
YPD
+0.1
+0.2
-0.2
-0.2
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
-0.2
+0.1
+0.1
-0.4
auxotrophy
YNB Glucose 75mM Arginine
+0.3
+0.1
-0.2
-0.1
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
+0.1
+0.1
-0.3
auxotrophy
YNB Glucose
+0.2
+0.1
-0.1
+0.1
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
+0.4
-0.2
+0.0
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.3
-0.2
+0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
+0.2
+0.2
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
-0.1
+0.1
+0.4
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
+0.6
+0.2
+0.0
-0.3
+0.0
facs on lipid accumulation
Sorted No BODIPY Gate
+0.2
+0.6
+0.1
+0.2
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.2
+0.4
+0.2
+0.0
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