Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10850 and 10851 are separated by 146 nucleotides10851 and 10852 are separated by 239 nucleotides10852 and 10853 are separated by 87 nucleotides10853 and 10854 are separated by 391 nucleotides mRNA_2482: 10850 - KOG0712 Molecular chaperone (DnaJ superfamily), at 252,498 to 254,224 10850 mRNA_2483: 10851 - K17541 SCYL2 SCY1-like protein 2, at 254,371 to 257,459 10851 mRNA_2484: 10852 - K11498 CENPE centromeric protein E, at 257,699 to 260,992 10852 mRNA_2485: 10853 - K07760 CDK cyclin-dependent kinase, at 261,080 to 262,482 10853 mRNA_2486: 10854 - KOG3134 Predicted membrane protein, at 262,874 to 263,661 10854
Group Condition mRNA_2482 mRNA_2483 mRNA_2484 mRNA_2485 mRNA_2486
10850 10851 10852 10853 10854
growth on ricinoleic acid YNB Ricinoleic Acid -0.5 -0.2 -0.1 -2.8 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -0.1 -0.1 -2.8 -0.0
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.5 +0.2 -2.4 -1.0
growth on oleic acid YNB Oleic Acid -0.1 -0.1 -0.2 -2.0 -0.3
growth on ypd YPD -0.2 -0.3 +0.1 -1.2 -0.7
growth on ricinoleic acid YNB Glucose -0.1 -0.0 -0.2 -1.5 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.4 -0.2 -0.6 -0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.0 -0.2 +0.3 -1.4 -0.0
auxotrophy Dropout Complete -0.1 -0.4 -0.3 -0.3 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.3 -0.1 -1.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.1 -0.1 -1.5 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.3 -0.1 -0.6 -0.3
auxotrophy YNB Glucose +0.1 -0.4 -0.4 -0.8 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.4 +0.1 -0.4 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.1 -0.1 -0.2 -0.1
growth on oleic acid YNB Glucose +0.1 -0.1 -0.1 -0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.1 -0.3 -0.3 -0.0 +0.3
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.2 +0.1 +0.0 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 -0.0 +0.2 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.0 +0.1 +0.8 -0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.0 +0.0 +1.3 -0.0
remove
mRNA_2482
plot
remove
mRNA_2483
plot
remove
mRNA_2484
remove
mRNA_2485
plot
remove
mRNA_2486
plot