Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10851 and 10852 are separated by 239 nucleotides10852 and 10853 are separated by 87 nucleotides10853 and 10854 are separated by 391 nucleotides10854 and 10855 are separated by 525 nucleotides mRNA_2483: 10851 - K17541 SCYL2 SCY1-like protein 2, at 254,371 to 257,459 10851 mRNA_2484: 10852 - K11498 CENPE centromeric protein E, at 257,699 to 260,992 10852 mRNA_2485: 10853 - K07760 CDK cyclin-dependent kinase, at 261,080 to 262,482 10853 mRNA_2486: 10854 - KOG3134 Predicted membrane protein, at 262,874 to 263,661 10854 mRNA_2487: 10855 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 264,187 to 266,262 10855
Group Condition mRNA_2483 mRNA_2484 mRNA_2485 mRNA_2486 mRNA_2487
10851 10852 10853 10854 10855
facs on lipid accumulation Sorted No BODIPY Gate -0.5 +0.2 -2.4 -1.0 -0.9
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.1 -2.8 -0.2 -0.5
growth on oleic acid YNB Oleic Acid -0.1 -0.2 -2.0 -0.3 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 -2.8 -0.0 +0.2
growth on ricinoleic acid YNB Glucose -0.0 -0.2 -1.5 -0.2 -0.6
growth on ypd YPD -0.3 +0.1 -1.2 -0.7 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 -1.3 +0.2 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.1 -0.6 -0.3 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 -0.1 -1.5 -0.1 +0.3
growth on oleic acid YNB Glucose -0.1 -0.1 -0.3 -0.1 -0.5
auxotrophy YNB Glucose -0.4 -0.4 -0.8 +0.3 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.1 -0.4 -0.4 +0.2
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.2 -0.6 -0.2 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 -0.2 -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.3 -1.4 -0.0 +0.8
auxotrophy Dropout Complete -0.4 -0.3 -0.3 -0.2 +1.1
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.1 +0.0 -0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.0 +0.2 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.3 -0.0 +0.3 +0.8
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 +0.1 +0.8 -0.3 +0.6
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.0 +1.3 -0.0 -0.0
remove
mRNA_2483
plot
remove
mRNA_2484
plot
remove
mRNA_2485
remove
mRNA_2486
plot
remove
mRNA_2487
plot