Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10853 and 10854 are separated by 391 nucleotides
10854 and 10855 are separated by 525 nucleotides
10855 and 10856 are separated by 1507 nucleotides
10856 and 10857 are separated by 393 nucleotides
mRNA_2485: 10853 - K07760 CDK cyclin-dependent kinase, at 261,080 to 262,482
10853
mRNA_2486: 10854 - KOG3134 Predicted membrane protein, at 262,874 to 263,661
10854
mRNA_2487: 10855 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 264,187 to 266,262
10855
mRNA_2488: 10856 - KOG1804 RNA helicase, at 267,770 to 269,827
10856
mRNA_2489: 10857 - HMMPfam-Surfeit locus protein 5 subunit 22 of Mediator complex-PF06179, at 270,221 to 270,948
10857
Group
Condition
mRNA
_2485
mRNA
_2486
mRNA
_2487
mRNA
_2488
mRNA
_2489
10853
10854
10855
10856
10857
facs on lipid accumulation
Sorted No BODIPY Gate
-2.4
-1.0
-0.9
-0.5
N.D.
growth on ricinoleic acid
YNB Ricinoleic Acid
-2.8
-0.2
-0.5
-0.1
N.D.
facs on lipid accumulation
Sorted Low BODIPY Gate
-2.8
-0.0
+0.2
-0.8
N.D.
growth on oleic acid
YNB Oleic Acid
-2.0
-0.3
-0.6
-0.2
N.D.
growth on ricinoleic acid
YNB Glucose
-1.5
-0.2
-0.6
+0.0
N.D.
growth on ypd
YPD
-1.2
-0.7
-0.1
+0.1
N.D.
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.3
+0.2
-0.5
-0.2
N.D.
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-1.5
-0.1
+0.3
-0.1
N.D.
ypd buoyancy
40 hrs Low Buoyancy
-0.6
-0.3
-0.4
+0.4
N.D.
growth on oleic acid
YNB Glucose
-0.3
-0.1
-0.5
+0.0
N.D.
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.4
+0.2
-0.2
N.D.
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.1
-0.3
+0.0
N.D.
facs on lipid accumulation
Sorted High BODIPY Gate
-1.4
-0.0
+0.8
+0.2
N.D.
auxotrophy
YNB Glucose
-0.8
+0.3
+0.3
+0.0
N.D.
auxotrophy
YNB Glucose 75mM Arginine
-0.6
-0.2
+0.5
+0.3
N.D.
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.2
-0.0
-0.1
+0.0
N.D.
ypd buoyancy
40 hrs High Buoyancy
+0.0
-0.3
+0.1
+0.2
N.D.
auxotrophy
Dropout Complete
-0.3
-0.2
+1.1
-0.0
N.D.
auxotrophy
YNB Glucose 75mM Methionine
-0.0
+0.3
+0.8
-0.0
N.D.
ypd buoyancy
40 hrs No Buoyancy Separation
+0.8
-0.3
+0.6
+0.2
N.D.
ypd buoyancy
40 hrs Median Buoyancy
+1.3
-0.0
-0.0
+0.2
N.D.
remove
mRNA_2485
plot
remove
mRNA_2486
plot
remove
mRNA_2487
remove
mRNA_2488
plot
remove
mRNA_2489
plot