Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10857 and 10858 are separated by 658 nucleotides
10858 and 10859 are separated by 202 nucleotides
10859 and 10860 are separated by 239 nucleotides
10860 and 10861 are separated by 891 nucleotides
mRNA_2489: 10857 - HMMPfam-Surfeit locus protein 5 subunit 22 of Mediator complex-PF06179, at 270,221 to 270,948
10857
mRNA_2490: 10858 - K14297 NUP98, ADAR2, NUP116 nuclear pore complex protein Nup98-Nup96, at 271,607 to 274,886
10858
mRNA_2491: 10859 - K12837 U2AF2 splicing factor U2AF 65 kDa subunit, at 275,089 to 277,521
10859
mRNA_2492: 10860 - HMMPfam-Rsm1-like-PF08600, at 277,761 to 278,480
10860
mRNA_2493: 10861 - KOG3098 Uncharacterized conserved protein, at 279,372 to 281,338
10861
Group
Condition
mRNA
_2489
mRNA
_2490
mRNA
_2491
mRNA
_2492
mRNA
_2493
10857
10858
10859
10860
10861
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
N.D.
N.D.
-1.0
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
N.D.
N.D.
-1.0
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
N.D.
N.D.
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.7
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
N.D.
N.D.
-0.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
N.D.
N.D.
-0.5
+0.0
auxotrophy
Dropout Complete
N.D.
N.D.
N.D.
-0.6
+0.1
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
N.D.
N.D.
-0.6
+0.3
growth on ricinoleic acid
YNB Glucose
N.D.
N.D.
N.D.
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
+0.0
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
-0.3
+0.1
growth on oleic acid
YNB Glucose
N.D.
N.D.
N.D.
+0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
N.D.
N.D.
N.D.
-0.1
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
N.D.
N.D.
-0.5
+0.4
growth on oleic acid
YNB Oleic Acid
N.D.
N.D.
N.D.
+0.2
-0.2
ypd buoyancy
40 hrs Median Buoyancy
N.D.
N.D.
N.D.
+0.0
-0.0
auxotrophy
YNB Glucose
N.D.
N.D.
N.D.
+0.0
+0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
N.D.
N.D.
-0.1
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
N.D.
N.D.
-0.1
+0.3
growth on ypd
YPD
N.D.
N.D.
N.D.
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
N.D.
N.D.
+0.1
+0.2
remove
mRNA_2489
plot
remove
mRNA_2490
plot
remove
mRNA_2491
remove
mRNA_2492
plot
remove
mRNA_2493
plot