Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10858 and 10859 are separated by 202 nucleotides10859 and 10860 are separated by 239 nucleotides10860 and 10861 are separated by 891 nucleotides10861 and 10862 are separated by 545 nucleotides mRNA_2490: 10858 - K14297 NUP98, ADAR2, NUP116 nuclear pore complex protein Nup98-Nup96, at 271,607 to 274,886 10858 mRNA_2491: 10859 - K12837 U2AF2 splicing factor U2AF 65 kDa subunit, at 275,089 to 277,521 10859 mRNA_2492: 10860 - HMMPfam-Rsm1-like-PF08600, at 277,761 to 278,480 10860 mRNA_2493: 10861 - KOG3098 Uncharacterized conserved protein, at 279,372 to 281,338 10861 mRNA_2494: 10862 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 281,884 to 283,232 10862
Group Condition mRNA_2490 mRNA_2491 mRNA_2492 mRNA_2493 mRNA_2494
10858 10859 10860 10861 10862
facs on lipid accumulation Sorted High BODIPY Gate N.D. N.D. -1.0 +0.2 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate N.D. N.D. -1.0 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. N.D. -0.5 +0.0 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation N.D. N.D. -0.6 +0.3 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid N.D. N.D. -0.4 -0.2 +0.0
auxotrophy Dropout Complete N.D. N.D. -0.6 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. N.D. -0.7 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. N.D. -0.3 +0.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. N.D. -0.4 -0.1 +0.0
growth on ricinoleic acid YNB Glucose N.D. N.D. -0.1 -0.1 -0.2
growth on oleic acid YNB Oleic Acid N.D. N.D. +0.2 -0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy N.D. N.D. +0.0 -0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy N.D. N.D. +0.0 -0.1 +0.1
growth on oleic acid YNB Glucose N.D. N.D. +0.2 -0.3 +0.1
auxotrophy YNB Glucose N.D. N.D. +0.0 +0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate N.D. N.D. -0.5 +0.4 +0.1
ypd buoyancy 40 hrs High Buoyancy N.D. N.D. -0.1 -0.0 +0.2
auxotrophy YNB Glucose 75mM Methionine N.D. N.D. -0.1 +0.3 -0.1
auxotrophy YNB Glucose 75mM Arginine N.D. N.D. -0.1 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. N.D. +0.1 +0.2 -0.1
growth on ypd YPD N.D. N.D. +0.1 +0.1 +0.0
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