Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10862 and 10863 are separated by 321 nucleotides10863 and 10864 are separated by 506 nucleotides10864 and 10865 are separated by 339 nucleotides10865 and 10866 are separated by 1070 nucleotides mRNA_2494: 10862 - HMMPfam-Taurine catabolism dioxygenase TauD, TfdA family-PF02668,SUPERFAMILY--SSF51197, at 281,884 to 283,232 10862 mRNA_2495: 10863 - K03507 DPB11 DNA replication regulator DPB11, at 283,554 to 287,606 10863 mRNA_2496: 10864 - KOG0254 Predicted transporter (major facilitator superfamily), at 288,113 to 290,739 10864 mRNA_2497: 10865 - KOG0379 Kelch repeat-containing proteins, at 291,079 to 294,153 10865 mRNA_2498: 10866 - HMMPfam-Polyketide cyclase / dehydrase and lipid transport-PF10604,SUPERFAMILY--SSF55961, at 295,224 to 296,091 10866
Group Condition mRNA_2494 mRNA_2495 mRNA_2496 mRNA_2497 mRNA_2498
10862 10863 10864 10865 10866
auxotrophy YNB Glucose 75mM Arginine +0.1 -1.2 -0.1 +0.2 -0.7
growth on ricinoleic acid YNB Glucose -0.2 -0.4 -0.2 -0.0 -0.8
auxotrophy Dropout Complete -0.2 -1.0 -0.1 -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.1 -0.3 +0.2 -0.7
auxotrophy YNB Glucose -0.1 -0.4 +0.1 +0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.0 -0.4 -0.2 +0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.5 +0.3 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 +0.6 -0.3 -0.2 -0.1
growth on oleic acid YNB Oleic Acid -0.0 +0.3 +0.1 +0.1 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.5 -0.1 -0.0 -0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.1 -0.2 +0.3 -0.0 -0.3
growth on oleic acid YNB Glucose +0.1 +0.5 +0.1 +0.1 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.4 +0.1 +0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.0 +0.3 +0.0 +0.1
growth on ypd YPD +0.0 -0.4 +0.2 +0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 -0.0 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 +0.5 +0.1 -0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.2 +0.4 -0.1 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 +1.2 +0.1 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 +0.6 +0.3 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.3 -0.0 +0.2 +0.2
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