Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10864 and 10865 are separated by 339 nucleotides10865 and 10866 are separated by 1070 nucleotides10866 and 10867 are separated by 1310 nucleotides10867 and 10868 are separated by 569 nucleotides mRNA_2496: 10864 - KOG0254 Predicted transporter (major facilitator superfamily), at 288,113 to 290,739 10864 mRNA_2497: 10865 - KOG0379 Kelch repeat-containing proteins, at 291,079 to 294,153 10865 mRNA_2498: 10866 - HMMPfam-Polyketide cyclase / dehydrase and lipid transport-PF10604,SUPERFAMILY--SSF55961, at 295,224 to 296,091 10866 mRNA_2499: 10867 - BLAST secreted protein [Moniliophthora roreri MCA 2997], at 297,402 to 298,448 10867 mRNA_2500: 10868 - Hypothetical Protein, at 299,018 to 301,561 10868
Group Condition mRNA_2496 mRNA_2497 mRNA_2498 mRNA_2499 mRNA_2500
10864 10865 10866 10867 10868
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.2 -0.7 -2.0 -0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.0 -0.8 -1.4 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.2 -0.1 +0.6 -2.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.2 -0.2 -1.8 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.0 -0.6 -0.4 -0.7
auxotrophy Dropout Complete -0.1 -0.1 -0.3 -1.1 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.2 -0.7 -1.0 +0.4
growth on oleic acid YNB Oleic Acid +0.1 +0.1 -0.7 -0.6 +0.1
growth on oleic acid YNB Glucose +0.1 +0.1 -0.7 -0.6 +0.1
auxotrophy YNB Glucose +0.1 +0.0 -0.1 -0.9 -0.0
auxotrophy YNB Glucose 75mM Methionine +0.3 -0.1 -0.1 -1.1 +0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.2 +0.2 -0.5 +0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.3 -0.0 -0.3 -0.1 +0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 +0.1 +0.3 -0.6 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.1 -0.1 +0.0 -0.2
growth on ypd YPD +0.2 +0.4 -0.1 -0.4 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.2 -0.2 +0.5 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.1 -0.3 +0.7 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.1 +0.2 -0.2 +0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 -0.1 +0.1 +0.7 -0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.0 +0.1 +0.2 -0.1
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