Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10867 and 10868 are separated by 569 nucleotides10868 and 10869 are separated by 233 nucleotides10869 and 10870 are separated by 250 nucleotides10870 and 10871 are separated by 527 nucleotides mRNA_2499: 10867 - BLAST secreted protein [Moniliophthora roreri MCA 2997], at 297,402 to 298,448 10867 mRNA_2500: 10868 - Hypothetical Protein, at 299,018 to 301,561 10868 mRNA_2501: 10869 - K00852 rbsK, RBKS ribokinase, at 301,795 to 303,224 10869 mRNA_2502: 10870 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 303,475 to 306,650 10870 mRNA_2503: 10871 - SUPERFAMILY--SSF63829, at 307,178 to 308,891 10871
Group Condition mRNA_2499 mRNA_2500 mRNA_2501 mRNA_2502 mRNA_2503
10867 10868 10869 10870 10871
growth on ricinoleic acid YNB Methylricinoleic Acid -1.8 -0.1 +0.1 -0.9 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid -2.0 -0.1 -0.3 -0.3 +0.2
growth on ricinoleic acid YNB Glucose -1.4 -0.1 -0.2 -0.8 +0.2
auxotrophy YNB Glucose 75mM Arginine -1.0 +0.4 -0.1 -0.9 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.6 -2.3 -0.7 +0.0 +0.7
growth on oleic acid YNB Oleic Acid -0.6 +0.1 +0.1 -0.6 -0.6
ypd buoyancy 40 hrs Median Buoyancy -0.6 +0.2 -0.5 -0.4 -0.4
auxotrophy YNB Glucose -0.9 -0.0 +0.0 -0.7 +0.1
auxotrophy Dropout Complete -1.1 +0.3 +0.2 -0.6 -0.2
growth on oleic acid YNB Glucose -0.6 +0.1 -0.0 -0.6 -0.3
auxotrophy YNB Glucose 75mM Methionine -1.1 +0.2 +0.5 -0.6 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.7 -0.2 +0.3 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate +0.5 -0.3 -0.3 -0.7 +0.2
growth on ypd YPD -0.4 -0.0 +0.2 -0.1 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.5 +0.1 -0.1 +0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.5 -0.1 -0.0 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.2 +0.0 -0.3 +0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 -0.3 +0.1 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.2 -0.1 -0.5 -0.1 +0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.7 -0.4 -0.2 +0.6 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 -0.3 +0.1 +0.7 +0.8
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