Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10872 and 10873 are separated by 49 nucleotides
10873 and 10874 overlap by 2 nucleotides
10874 and 10875 are separated by 648 nucleotides
10875 and 10876 are separated by 904 nucleotides
mRNA_2504: 10872 - BLAST Immunoglobulin-like domain contaning protein [Rho..., at 309,895 to 311,581
10872
mRNA_2505: 10873 - KOG3299 Uncharacterized conserved protein, at 311,631 to 312,608
10873
mRNA_2506: 10874 - HMMPfam-GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p-PF13839, at 312,607 to 314,311
10874
mRNA_2507: 10875 - K11232 YPD1 osomolarity two-component system, phosphorelay intermediate protein YPD1, at 314,960 to 315,808
10875
mRNA_2508: 10876 - BLAST proteophosphoglycan ppg4 [Lichtheimia corymbifera JMR..., at 316,713 to 320,410
10876
Group
Condition
mRNA
_2504
mRNA
_2505
mRNA
_2506
mRNA
_2507
mRNA
_2508
10872
10873
10874
10875
10876
facs on lipid accumulation
Sorted High BODIPY Gate
+0.0
-1.1
-0.1
N.D.
+0.1
auxotrophy
Dropout Complete
-0.4
-0.5
+0.0
N.D.
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.7
+0.4
N.D.
-0.5
auxotrophy
YNB Glucose
-0.3
+0.0
+0.1
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.3
+0.2
-0.0
N.D.
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.4
+0.0
N.D.
-0.1
growth on ypd
YPD
-0.2
+0.1
+0.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
+0.2
-0.0
N.D.
-0.1
growth on oleic acid
YNB Glucose
-0.2
+0.0
+0.1
N.D.
+0.2
growth on oleic acid
YNB Oleic Acid
+0.0
-0.1
+0.1
N.D.
+0.1
ypd buoyancy
40 hrs Median Buoyancy
+0.0
+0.3
+0.1
N.D.
-0.1
growth on ricinoleic acid
YNB Glucose
+0.1
+0.5
-0.1
N.D.
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
+0.4
+0.0
N.D.
+0.0
auxotrophy
YNB Glucose 75mM Methionine
-0.1
+0.3
+0.1
N.D.
+0.1
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
+0.2
+0.0
N.D.
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.0
+0.7
-0.2
N.D.
+0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
+1.0
-0.3
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.7
-0.1
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.1
+0.8
-0.0
N.D.
+0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.1
+0.9
-0.2
N.D.
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.0
+1.4
-0.1
N.D.
+0.1
remove
mRNA_2504
plot
remove
mRNA_2505
plot
remove
mRNA_2506
remove
mRNA_2507
plot
remove
mRNA_2508
plot