Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10875 and 10876 are separated by 904 nucleotides10876 and 10877 are separated by 432 nucleotides10877 and 10878 are separated by 217 nucleotides10878 and 10879 are separated by 598 nucleotides mRNA_2507: 10875 - K11232 YPD1 osomolarity two-component system, phosphorelay intermediate protein YPD1, at 314,960 to 315,808 10875 mRNA_2508: 10876 - BLAST proteophosphoglycan ppg4 [Lichtheimia corymbifera JMR..., at 316,713 to 320,410 10876 mRNA_2509: 10877 - HMMPfam-PI31 proteasome regulator-PF08577,HMMPfam-PI31 proteasome regulator N-terminal-PF11566, at 320,843 to 322,229 10877 mRNA_2510: 10878 - K09272 SSRP1 structure-specific recognition protein 1, at 322,447 to 324,875 10878 mRNA_2511: 10879 - Hypothetical Protein, at 325,474 to 325,902 10879
Group Condition mRNA_2507 mRNA_2508 mRNA_2509 mRNA_2510 mRNA_2511
10875 10876 10877 10878 10879
ypd buoyancy 40 hrs No Buoyancy Separation N.D. -0.5 -0.1 N.D. -2.0
ypd buoyancy 40 hrs Median Buoyancy N.D. -0.1 -0.0 N.D. -1.3
ypd buoyancy 40 hrs Low Buoyancy N.D. +0.2 -0.6 N.D. -1.0
facs on lipid accumulation Sorted No BODIPY Gate N.D. +0.1 +0.4 N.D. -1.5
ypd buoyancy 40 hrs High Buoyancy N.D. +0.0 -0.1 N.D. -0.6
facs on lipid accumulation Sorted Low BODIPY Gate N.D. -0.1 +0.1 N.D. -0.6
growth on oleic acid YNB Oleic Acid N.D. +0.1 +0.1 N.D. -0.8
growth on ricinoleic acid YNB Methylricinoleic Acid N.D. +0.1 -0.2 N.D. -0.4
facs on lipid accumulation Sorted High BODIPY Gate N.D. +0.1 +0.9 N.D. -1.3
auxotrophy YNB Glucose 75mM Methionine N.D. +0.1 +0.4 N.D. -0.6
auxotrophy YNB Glucose N.D. -0.2 +0.3 N.D. -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy N.D. +0.1 -0.8 N.D. +0.7
growth on oleic acid YNB Glucose N.D. +0.2 -0.4 N.D. +0.4
growth on ricinoleic acid YNB Glucose N.D. -0.1 +0.2 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy N.D. +0.0 +0.6 N.D. -0.2
auxotrophy YNB Glucose 75mM Arginine N.D. -0.2 +0.4 N.D. +0.3
growth on ypd YPD N.D. -0.1 +0.3 N.D. +0.5
growth on ricinoleic acid YNB Ricinoleic Acid N.D. -0.1 +0.3 N.D. +0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation N.D. -0.1 +1.0 N.D. +0.0
auxotrophy Dropout Complete N.D. -0.0 -0.1 N.D. +1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy N.D. +0.3 +0.8 N.D. +0.4
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