Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10877 and 10878 are separated by 217 nucleotides
10878 and 10879 are separated by 598 nucleotides
10879 and 10880 are separated by 845 nucleotides
10880 and 10881 are separated by 238 nucleotides
mRNA_2509: 10877 - HMMPfam-PI31 proteasome regulator-PF08577,HMMPfam-PI31 proteasome regulator N-terminal-PF11566, at 320,843 to 322,229
10877
mRNA_2510: 10878 - K09272 SSRP1 structure-specific recognition protein 1, at 322,447 to 324,875
10878
mRNA_2511: 10879 - Hypothetical Protein, at 325,474 to 325,902
10879
mRNA_2512: 10880 - Hypothetical Protein, at 326,748 to 327,391
10880
mRNA_2513: 10881 - Hypothetical Protein, at 327,630 to 328,925
10881
Group
Condition
mRNA
_2509
mRNA
_2510
mRNA
_2511
mRNA
_2512
mRNA
_2513
10877
10878
10879
10880
10881
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
N.D.
-2.0
+0.3
-0.4
ypd buoyancy
40 hrs Low Buoyancy
-0.6
N.D.
-1.0
-0.1
-0.2
facs on lipid accumulation
Sorted No BODIPY Gate
+0.4
N.D.
-1.5
-0.4
+0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.0
N.D.
-1.3
-0.0
-0.1
growth on oleic acid
YNB Oleic Acid
+0.1
N.D.
-0.8
-0.2
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
N.D.
-0.6
+0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
N.D.
+0.7
-0.6
-0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.1
N.D.
-0.6
-0.5
+0.3
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
N.D.
-0.4
-0.1
+0.1
facs on lipid accumulation
Sorted High BODIPY Gate
+0.9
N.D.
-1.3
-0.3
+0.1
growth on oleic acid
YNB Glucose
-0.4
N.D.
+0.4
-0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.4
N.D.
-0.6
+0.0
+0.4
auxotrophy
YNB Glucose
+0.3
N.D.
-0.1
-0.2
+0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.6
N.D.
-0.2
-0.1
-0.0
growth on ricinoleic acid
YNB Glucose
+0.2
N.D.
+0.1
+0.5
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.8
N.D.
+0.4
-0.1
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+1.0
N.D.
+0.0
-0.0
+0.1
growth on ypd
YPD
+0.3
N.D.
+0.5
+0.2
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.3
N.D.
+0.5
+0.3
-0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.4
N.D.
+0.3
+0.3
+0.3
auxotrophy
Dropout Complete
-0.1
N.D.
+1.1
+0.1
+0.3
remove
mRNA_2509
plot
remove
mRNA_2510
plot
remove
mRNA_2511
remove
mRNA_2512
plot
remove
mRNA_2513
plot