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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10878 and 10879 are separated by 598 nucleotides
10879 and 10880 are separated by 845 nucleotides
10880 and 10881 are separated by 238 nucleotides
10881 and 10882 are separated by 1273 nucleotides
mRNA_2510: 10878 - K09272 SSRP1 structure-specific recognition protein 1, at 322,447 to 324,875
10878
mRNA_2511: 10879 - Hypothetical Protein, at 325,474 to 325,902
10879
mRNA_2512: 10880 - Hypothetical Protein, at 326,748 to 327,391
10880
mRNA_2513: 10881 - Hypothetical Protein, at 327,630 to 328,925
10881
mRNA_2514: 10882 - Hypothetical Protein, at 330,199 to 330,672
10882
Group
Condition
mRNA
_2510
mRNA
_2511
mRNA
_2512
mRNA
_2513
mRNA
_2514
10878
10879
10880
10881
10882
ypd buoyancy
40 hrs No Buoyancy Separation
N.D.
-2.0
+0.3
-0.4
-1.0
facs on lipid accumulation
Sorted No BODIPY Gate
N.D.
-1.5
-0.4
+0.0
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
N.D.
-1.3
-0.3
+0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
N.D.
-1.0
-0.1
-0.2
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
N.D.
-0.6
-0.5
+0.3
-0.6
ypd buoyancy
40 hrs Median Buoyancy
N.D.
-1.3
-0.0
-0.1
+0.1
growth on oleic acid
YNB Oleic Acid
N.D.
-0.8
-0.2
-0.1
+0.4
ypd buoyancy
40 hrs High Buoyancy
N.D.
-0.6
+0.1
-0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
N.D.
-0.4
-0.1
+0.1
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
N.D.
-0.2
-0.1
-0.0
+0.2
auxotrophy
YNB Glucose 75mM Methionine
N.D.
-0.6
+0.0
+0.4
+0.2
auxotrophy
YNB Glucose
N.D.
-0.1
-0.2
+0.3
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
N.D.
+0.4
-0.1
-0.1
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
N.D.
+0.0
-0.0
+0.1
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
N.D.
+0.7
-0.6
-0.1
+0.4
growth on oleic acid
YNB Glucose
N.D.
+0.4
-0.1
+0.1
+0.1
growth on ypd
YPD
N.D.
+0.5
+0.2
-0.0
-0.0
growth on ricinoleic acid
YNB Glucose
N.D.
+0.1
+0.5
-0.0
+0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
N.D.
+0.5
+0.3
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Arginine
N.D.
+0.3
+0.3
+0.3
-0.0
auxotrophy
Dropout Complete
N.D.
+1.1
+0.1
+0.3
-0.0
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