Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10886 and 10887 are separated by 1213 nucleotides10887 and 10888 are separated by 523 nucleotides10888 and 10889 are separated by 346 nucleotides10889 and 10890 are separated by 154 nucleotides mRNA_2518: 10886 - K03189 ureG urease accessory protein, at 340,022 to 341,494 10886 mRNA_2519: 10887 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 342,708 to 344,522 10887 mRNA_2520: 10888 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 345,046 to 346,549 10888 mRNA_2521: 10889 - BLAST beta-glucosidase 1 precursor [Aspergillus rambellii], at 346,896 to 348,680 10889 mRNA_2522: 10890 - BLAST GPI ethanolamine phosphate transferase 2 [Talaromyces..., at 348,835 to 350,135 10890
Group Condition mRNA_2518 mRNA_2519 mRNA_2520 mRNA_2521 mRNA_2522
10886 10887 10888 10889 10890
ypd buoyancy 40 hrs Low Buoyancy -0.0 +0.1 -0.1 -1.6 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.2 -0.2 -0.8 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.3 +0.5 -0.1 -2.1 +0.5
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2 +0.0 -0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.3 -0.3 -0.3 +0.1
growth on oleic acid YNB Oleic Acid +0.1 -0.1 +0.5 -0.8 -0.3
growth on ypd YPD +0.4 +0.2 -0.2 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.5 -0.2 -0.0 -0.3 -0.0
growth on oleic acid YNB Glucose -0.2 +0.1 +0.4 +0.5 -0.3
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.0 +0.3 +0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.1 +0.4 +0.5 -0.2
auxotrophy YNB Glucose +0.3 -0.2 +0.4 +0.3 +0.1
auxotrophy Dropout Complete +0.1 -0.1 +0.4 +0.6 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.1 -0.5 +1.2 +0.2
growth on ricinoleic acid YNB Glucose -0.1 +0.2 +0.4 +0.8 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 +0.2 +0.7 +0.6 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.3 +0.1 +0.5 +0.5 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.5 -0.2 +0.5 +0.4 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.1 +0.1 +1.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 +0.3 +0.2 +1.8 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 +0.4 +1.0 +0.9 +0.0
remove
mRNA_2518
plot
remove
mRNA_2519
plot
remove
mRNA_2520
remove
mRNA_2521
plot
remove
mRNA_2522
plot