Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10887 and 10888 are separated by 523 nucleotides10888 and 10889 are separated by 346 nucleotides10889 and 10890 are separated by 154 nucleotides10890 and 10891 are separated by 880 nucleotides mRNA_2519: 10887 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 342,708 to 344,522 10887 mRNA_2520: 10888 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 345,046 to 346,549 10888 mRNA_2521: 10889 - BLAST beta-glucosidase 1 precursor [Aspergillus rambellii], at 346,896 to 348,680 10889 mRNA_2522: 10890 - BLAST GPI ethanolamine phosphate transferase 2 [Talaromyces..., at 348,835 to 350,135 10890 mRNA_2523: 10891 - Hypothetical Protein, at 351,016 to 351,939 10891
Group Condition mRNA_2519 mRNA_2520 mRNA_2521 mRNA_2522 mRNA_2523
10887 10888 10889 10890 10891
ypd buoyancy 40 hrs Low Buoyancy +0.1 -0.1 -1.6 +0.1 +0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.1 -2.1 +0.5 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 -0.3 +0.1 -0.3
growth on ypd YPD +0.2 -0.2 -0.4 -0.2 -0.3
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.2 -0.8 +0.2 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 +0.0 -0.3 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 -0.0 -0.3 -0.0 +0.0
growth on oleic acid YNB Oleic Acid -0.1 +0.5 -0.8 -0.3 +0.7
auxotrophy YNB Glucose -0.2 +0.4 +0.3 +0.1 +0.2
growth on ricinoleic acid YNB Glucose +0.2 +0.4 +0.8 -0.2 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.4 +0.5 -0.2 +0.5
growth on oleic acid YNB Glucose +0.1 +0.4 +0.5 -0.3 +0.4
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 +0.7 +0.6 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.5 +1.2 +0.2 +0.2
auxotrophy Dropout Complete -0.1 +0.4 +0.6 -0.0 +0.3
auxotrophy YNB Glucose 75mM Arginine -0.0 +0.3 +0.3 +0.1 +0.6
facs on lipid accumulation Sorted Low BODIPY Gate +0.1 +0.1 +1.4 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.5 +0.4 +0.2 +0.5
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.5 +0.5 -0.0 +0.4
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +1.0 +0.9 +0.0 -0.6
facs on lipid accumulation Sorted High BODIPY Gate +0.3 +0.2 +1.8 -0.2 -0.1
remove
mRNA_2519
plot
remove
mRNA_2520
plot
remove
mRNA_2521
remove
mRNA_2522
plot
remove
mRNA_2523
plot