Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10889 and 10890 are separated by 154 nucleotides10890 and 10891 are separated by 880 nucleotides10891 and 10892 are separated by 433 nucleotides10892 and 10893 are separated by 1038 nucleotides mRNA_2521: 10889 - BLAST beta-glucosidase 1 precursor [Aspergillus rambellii], at 346,896 to 348,680 10889 mRNA_2522: 10890 - BLAST GPI ethanolamine phosphate transferase 2 [Talaromyces..., at 348,835 to 350,135 10890 mRNA_2523: 10891 - Hypothetical Protein, at 351,016 to 351,939 10891 mRNA_2524: 10892 - BLAST Immunoglobulin-like domain contaning protein [Rho..., at 352,373 to 353,826 10892 mRNA_2525: 10893 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 354,865 to 358,254 10893
Group Condition mRNA_2521 mRNA_2522 mRNA_2523 mRNA_2524 mRNA_2525
10889 10890 10891 10892 10893
ypd buoyancy 40 hrs No Buoyancy Separation -2.1 +0.5 -0.2 +0.0 +0.3
ypd buoyancy 40 hrs Low Buoyancy -1.6 +0.1 +0.0 -0.1 +0.2
growth on ypd YPD -0.4 -0.2 -0.3 -0.3 -0.1
growth on oleic acid YNB Oleic Acid -0.8 -0.3 +0.7 -0.3 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.8 +0.2 +0.1 +0.1 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 +0.1 -0.3 +0.1 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.0 -0.1 +0.4 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.9 +0.0 -0.6 -0.4 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.0 +0.0 -0.0 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.5 -0.2 +0.5 -0.3 -0.2
growth on oleic acid YNB Glucose +0.5 -0.3 +0.4 -0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 -0.1 -0.4 +0.6 +0.0
auxotrophy Dropout Complete +0.6 -0.0 +0.3 -0.0 -0.1
auxotrophy YNB Glucose +0.3 +0.1 +0.2 +0.1 +0.0
growth on ricinoleic acid YNB Glucose +0.8 -0.2 -0.4 +0.7 -0.1
auxotrophy YNB Glucose 75mM Methionine +0.5 -0.0 +0.4 +0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +1.4 -0.2 -0.2 -0.1 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.3 +0.1 +0.6 +0.2 -0.0
facs on lipid accumulation Sorted High BODIPY Gate +1.8 -0.2 -0.1 -0.4 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.4 +0.2 +0.5 +0.2 +0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.2 +0.2 +0.2 +0.0 -0.1
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