Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10890 and 10891 are separated by 880 nucleotides10891 and 10892 are separated by 433 nucleotides10892 and 10893 are separated by 1038 nucleotides10893 and 10894 are separated by 601 nucleotides mRNA_2522: 10890 - BLAST GPI ethanolamine phosphate transferase 2 [Talaromyces..., at 348,835 to 350,135 10890 mRNA_2523: 10891 - Hypothetical Protein, at 351,016 to 351,939 10891 mRNA_2524: 10892 - BLAST Immunoglobulin-like domain contaning protein [Rho..., at 352,373 to 353,826 10892 mRNA_2525: 10893 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 354,865 to 358,254 10893 mRNA_2526: 10894 - HMMPfam-Protein of unknown function (DUF1212)-PF06738,HMMPfam-Protein of unknown function (DUF3815)-PF12821, at 358,856 to 360,952 10894
Group Condition mRNA_2522 mRNA_2523 mRNA_2524 mRNA_2525 mRNA_2526
10890 10891 10892 10893 10894
growth on ypd YPD -0.2 -0.3 -0.3 -0.1 +0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.0 -0.6 -0.4 +0.0 +0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 -0.4 +0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 +0.5 -0.3 -0.2 +0.1
growth on oleic acid YNB Glucose -0.3 +0.4 -0.2 -0.0 +0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2 -0.1 +0.2 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.0 -0.1 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.3 +0.1 +0.1 +0.0
auxotrophy Dropout Complete -0.0 +0.3 -0.0 -0.1 +0.0
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.1 +0.1 +0.1 -0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.4 +0.7 -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.2 +0.2 +0.0 -0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.1 +0.4 -0.0 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.5 -0.2 +0.0 +0.3 -0.3
growth on oleic acid YNB Oleic Acid -0.3 +0.7 -0.3 +0.0 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 +0.0 -0.0 +0.3 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.4 +0.6 +0.0 +0.4
auxotrophy YNB Glucose +0.1 +0.2 +0.1 +0.0 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 +0.4 +0.3 -0.2 +0.2
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.6 +0.2 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.5 +0.2 +0.1 +0.3
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