Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10895 and 10896 are separated by 385 nucleotides10896 and 10897 are separated by 159 nucleotides10897 and 10898 are separated by 272 nucleotides10898 and 10899 are separated by 1622 nucleotides mRNA_2527: 10895 - BLAST protein DGCR14-like [Mucor ambiguus], at 363,824 to 364,696 10895 mRNA_2528: 10896 - HMMPfam-Fungal chitosanase of glycosyl hydrolase group 75-PF07335, at 365,082 to 366,780 10896 mRNA_2529: 10897 - K01613 psd, PISD phosphatidylserine decarboxylase, at 366,940 to 368,677 10897 mRNA_2530: 10898 - K14634 TIGAR fructose-2,6-bisphosphatase, at 368,950 to 370,646 10898 mRNA_2531: 10899 - KOG2816 Predicted transporter ADD1 (major facilitator superfamily), at 372,269 to 375,397 10899
Group Condition mRNA_2527 mRNA_2528 mRNA_2529 mRNA_2530 mRNA_2531
10895 10896 10897 10898 10899
auxotrophy Dropout Complete +0.1 +0.1 -0.5 -0.4 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -0.0 +0.1 +0.3 -0.4
growth on oleic acid YNB Oleic Acid +0.5 +0.0 -0.3 -0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.4 -0.5 -0.3 +0.6
ypd buoyancy 40 hrs High Buoyancy +0.2 -0.3 +0.0 +0.0 -0.1
growth on oleic acid YNB Glucose +0.1 +0.5 -0.4 +0.0 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.4 -0.2 -0.4 -0.2 +0.6
facs on lipid accumulation Sorted No BODIPY Gate +0.1 +0.8 -0.1 -0.4 -0.3
growth on ricinoleic acid YNB Glucose +0.4 +0.1 -0.4 -0.0 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.4 +0.5 -0.1 -0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.1 +0.2 +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine +0.5 +0.1 -0.1 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.9 +1.1 +0.5 +0.2 -0.3
growth on ypd YPD +0.4 -0.5 -0.2 +0.0 +0.9
ypd buoyancy 40 hrs Low Buoyancy +1.0 +0.1 -0.5 -0.1 +0.2
ypd buoyancy 40 hrs Median Buoyancy +0.7 +0.0 -0.2 -0.0 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.9 +0.5 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.6 +0.3 +0.4 +0.2
auxotrophy YNB Glucose +0.9 +0.5 +0.1 -0.2 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 +0.3 +0.3 +0.4 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate +0.9 +0.8 +0.2 +0.1 +0.1
remove
mRNA_2527
plot
remove
mRNA_2528
plot
remove
mRNA_2529
remove
mRNA_2530
plot
remove
mRNA_2531
plot