Fitness Browser
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
or
choose conditions
or try the
comparative fitness browser
500 nt
10902 and 10903 are separated by 22 nucleotides
10903 and 10904 are separated by 359 nucleotides
10904 and 10905 are separated by 738 nucleotides
10905 and 10906 are separated by 169 nucleotides
mRNA_2534: 10902 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407, at 384,523 to 387,549
10902
mRNA_2535: 10903 - Hypothetical Protein, at 387,572 to 388,066
10903
mRNA_2536: 10904 - K15601 KDM3 lysine-specific demethylase 3, at 388,426 to 391,874
10904
mRNA_2537: 10905 - BLAST Alba domain-containing protein [Rhizoctonia solani AG..., at 392,613 to 393,652
10905
mRNA_2538: 10906 - SUPERFAMILY--SSF56112, at 393,822 to 395,821
10906
Group
Condition
mRNA
_2534
mRNA
_2535
mRNA
_2536
mRNA
_2537
mRNA
_2538
10902
10903
10904
10905
10906
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
+0.1
-1.2
N.D.
-0.8
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
+0.1
-1.0
N.D.
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
-0.7
N.D.
-0.2
auxotrophy
Dropout Complete
-0.4
-0.0
-0.1
N.D.
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.0
-0.1
-0.2
N.D.
-0.2
growth on ricinoleic acid
YNB Glucose
-0.2
-0.1
-0.3
N.D.
+0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.2
+0.3
N.D.
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.3
-0.0
-0.2
N.D.
-0.3
ypd buoyancy
40 hrs Median Buoyancy
-0.1
-0.0
+0.0
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
+0.0
-0.2
N.D.
+0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.1
+0.1
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.3
-0.2
+0.2
N.D.
-0.5
growth on oleic acid
YNB Oleic Acid
+0.2
-0.1
-0.2
N.D.
+0.0
growth on ypd
YPD
+0.1
-0.1
+0.3
N.D.
-0.2
auxotrophy
YNB Glucose 75mM Methionine
+0.2
+0.2
-0.2
N.D.
-0.1
auxotrophy
YNB Glucose
+0.0
+0.2
-0.1
N.D.
+0.0
ypd buoyancy
40 hrs High Buoyancy
+0.0
+0.0
+0.2
N.D.
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.1
+0.3
N.D.
+0.0
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.2
-0.4
N.D.
+0.4
ypd buoyancy
40 hrs No Buoyancy Separation
+0.0
-0.2
+0.6
N.D.
+0.1
growth on oleic acid
YNB Glucose
+0.2
-0.0
+0.3
N.D.
+0.2
remove
mRNA_2534
plot
remove
mRNA_2535
plot
remove
mRNA_2536
remove
mRNA_2537
plot
remove
mRNA_2538
plot