Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10906 and 10907 are separated by 272 nucleotides10907 and 10908 are separated by 197 nucleotides10908 and 10909 are separated by 457 nucleotides10909 and 10910 are separated by 198 nucleotides mRNA_2538: 10906 - SUPERFAMILY--SSF56112, at 393,822 to 395,821 10906 mRNA_2539: 10907 - Hypothetical Protein, at 396,094 to 398,437 10907 mRNA_2540: 10908 - SUPERFAMILY--SSF52058, at 398,635 to 399,613 10908 mRNA_2541: 10909 - HMMPfam-Hemerythrin HHE cation binding domain-PF01814, at 400,071 to 401,322 10909 mRNA_2542: 10910 - Hypothetical Protein, at 401,521 to 403,165 10910
Group Condition mRNA_2538 mRNA_2539 mRNA_2540 mRNA_2541 mRNA_2542
10906 10907 10908 10909 10910
growth on ricinoleic acid YNB Glucose +0.1 -0.3 -0.1 -2.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.7 -0.0 -1.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.4 -0.5 -0.5 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 -0.1 +0.2 -0.8 -0.2
growth on oleic acid YNB Oleic Acid +0.0 -0.2 +0.1 -0.8 -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.8 +0.1 -0.1
growth on oleic acid YNB Glucose +0.2 -0.1 +0.2 -1.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 +0.0 -0.1 +0.2 -0.1
auxotrophy YNB Glucose +0.0 -0.4 -0.2 -0.4 +0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.5 -0.1 -0.1 -0.4 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.0 +0.2 -1.0 +0.1
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.5 -0.1 +0.0 +0.0
auxotrophy Dropout Complete -0.0 -0.7 -0.2 +0.5 -0.0
growth on ypd YPD -0.2 -0.3 -0.3 +0.2 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 +0.3 +0.0 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 +0.1 +0.0 -0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -0.1 +0.0 -0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4 -0.2 +0.7 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.0 -0.4 +0.8 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 -0.1 -0.1 +0.9 -0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.3 +0.2 +0.2 +0.4
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