Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10908 and 10909 are separated by 457 nucleotides10909 and 10910 are separated by 198 nucleotides10910 and 10911 are separated by 273 nucleotides10911 and 10912 are separated by 363 nucleotides mRNA_2540: 10908 - SUPERFAMILY--SSF52058, at 398,635 to 399,613 10908 mRNA_2541: 10909 - HMMPfam-Hemerythrin HHE cation binding domain-PF01814, at 400,071 to 401,322 10909 mRNA_2542: 10910 - Hypothetical Protein, at 401,521 to 403,165 10910 mRNA_2543: 10911 - Hypothetical Protein, at 403,439 to 404,457 10911 mRNA_2544: 10912 - K00046 idnO gluconate 5-dehydrogenase, at 404,821 to 406,181 10912
Group Condition mRNA_2540 mRNA_2541 mRNA_2542 mRNA_2543 mRNA_2544
10908 10909 10910 10911 10912
growth on ricinoleic acid YNB Glucose -0.1 -2.1 +0.2 -0.3 -0.2
growth on oleic acid YNB Oleic Acid +0.1 -0.8 -0.3 -0.5 -0.5
growth on oleic acid YNB Glucose +0.2 -1.1 -0.1 -0.6 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.0 -1.1 -0.1 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.5 -0.5 -0.1 -0.1 -0.2
auxotrophy YNB Glucose -0.2 -0.4 +0.2 -0.7 +0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 +0.0 +0.0 -1.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.8 +0.1 -0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.2 -1.0 +0.1 +0.1 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.8 -0.2 +0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -0.1 +0.1 -0.4 -0.4
auxotrophy Dropout Complete -0.2 +0.5 -0.0 -0.5 -0.0
auxotrophy YNB Glucose 75mM Methionine -0.2 +0.7 +0.1 -0.7 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.2 -0.1 +0.3 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.0 -0.1 -0.1 +0.1 +0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 +0.2 -0.1 +0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.4 +0.8 -0.0 +0.0 +0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.4 +0.3 +0.7 +0.3
ypd buoyancy 40 hrs Median Buoyancy -0.1 +0.9 -0.1 +0.1 +0.0
growth on ypd YPD -0.3 +0.2 +0.3 +0.6 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.2 +0.2 +0.4 +0.4 +0.4
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