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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10909 and 10910 are separated by 198 nucleotides
10910 and 10911 are separated by 273 nucleotides
10911 and 10912 are separated by 363 nucleotides
10912 and 10913 are separated by 1011 nucleotides
mRNA_2541: 10909 - HMMPfam-Hemerythrin HHE cation binding domain-PF01814, at 400,071 to 401,322
10909
mRNA_2542: 10910 - Hypothetical Protein, at 401,521 to 403,165
10910
mRNA_2543: 10911 - Hypothetical Protein, at 403,439 to 404,457
10911
mRNA_2544: 10912 - K00046 idnO gluconate 5-dehydrogenase, at 404,821 to 406,181
10912
mRNA_2545: 10913 - K05767 IQGAP2_3 Ras GTPase-activating-like protein IQGAP2/3, at 407,193 to 413,083
10913
Group
Condition
mRNA
_2541
mRNA
_2542
mRNA
_2543
mRNA
_2544
mRNA
_2545
10909
10910
10911
10912
10913
growth on oleic acid
YNB Glucose
-1.1
-0.1
-0.6
-0.2
-1.0
auxotrophy
YNB Glucose
-0.4
+0.2
-0.7
+0.0
-2.0
growth on ricinoleic acid
YNB Glucose
-2.1
+0.2
-0.3
-0.2
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-1.1
-0.1
-0.2
-0.1
-1.1
growth on oleic acid
YNB Oleic Acid
-0.8
-0.3
-0.5
-0.5
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.1
+0.1
-0.4
-0.4
-1.7
auxotrophy
YNB Glucose 75mM Arginine
+0.0
+0.0
-1.0
+0.0
-1.3
auxotrophy
YNB Glucose 75mM Methionine
+0.7
+0.1
-0.7
-0.1
-1.8
auxotrophy
Dropout Complete
+0.5
-0.0
-0.5
-0.0
-1.5
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.2
-0.1
+0.2
-0.2
-1.6
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-1.0
+0.1
+0.1
-0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.1
-0.1
-0.2
-0.4
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.2
-0.1
+0.3
-0.1
-1.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.4
+0.3
+0.7
+0.3
-1.9
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.1
+0.1
+0.0
-0.8
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.8
-0.2
+0.2
-0.1
+0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.1
-0.1
-0.1
-0.1
-0.3
facs on lipid accumulation
Sorted High BODIPY Gate
+0.2
+0.4
+0.4
+0.4
-0.9
ypd buoyancy
40 hrs Median Buoyancy
+0.9
-0.1
+0.1
+0.0
-0.4
ypd buoyancy
40 hrs High Buoyancy
+0.8
-0.0
+0.0
+0.3
+0.2
growth on ypd
YPD
+0.2
+0.3
+0.6
+0.2
+1.1
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