Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10915 and 10916 are separated by 206 nucleotides10916 and 10917 are separated by 110 nucleotides10917 and 10918 are separated by 210 nucleotides10918 and 10919 are separated by 52 nucleotides mRNA_2547: 10915 - HMMPfam-Protein kinase domain-PF00069,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 416,552 to 418,992 10915 mRNA_2548: 10916 - KOG1943 Beta-tubulin folding cofactor D, at 419,199 to 423,600 10916 mRNA_2549: 10917 - HMMPfam-Chromatin modification-related protein EAF7-PF07904, at 423,711 to 424,964 10917 mRNA_2550: 10918 - KOG3116 Predicted C3H1-type Zn-finger protein, at 425,175 to 426,192 10918 mRNA_2551: 10919 - K00799 GST, gst glutathione S-transferase, at 426,245 to 427,122 10919
Group Condition mRNA_2547 mRNA_2548 mRNA_2549 mRNA_2550 mRNA_2551
10915 10916 10917 10918 10919
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.8 -0.9 -0.3 -1.2
auxotrophy Dropout Complete -0.7 -0.1 -0.8 -0.4 -1.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 +1.6 +0.1 -2.3 -1.6
facs on lipid accumulation Sorted No BODIPY Gate +0.2 +0.2 -1.4 -0.4 -1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -1.2 +0.7 -0.4 -0.8
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.0 -0.1 -1.4
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 -0.4 -0.5 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.5 -0.2 +0.1 -1.1
auxotrophy YNB Glucose -0.2 +0.2 -0.7 -0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.1 -0.1 +0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.8 -0.2 -0.3 -0.8
growth on oleic acid YNB Oleic Acid -0.3 +0.5 -0.4 -0.5 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.8 +2.2 -1.0 -0.7
growth on oleic acid YNB Glucose -0.1 -0.4 -0.0 +0.0 +0.6
growth on ricinoleic acid YNB Glucose -0.1 +0.2 +0.5 -0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate +0.4 -0.2 +0.7 -0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +0.7 +0.4 -0.0 -0.4
growth on ypd YPD -0.0 -0.8 +1.0 -0.0 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.6 +1.0 +0.0 +1.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.6 +1.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 -0.4 +0.6 +0.2 +1.2
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