Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10916 and 10917 are separated by 110 nucleotides10917 and 10918 are separated by 210 nucleotides10918 and 10919 are separated by 52 nucleotides10919 and 10920 are separated by 959 nucleotides mRNA_2548: 10916 - KOG1943 Beta-tubulin folding cofactor D, at 419,199 to 423,600 10916 mRNA_2549: 10917 - HMMPfam-Chromatin modification-related protein EAF7-PF07904, at 423,711 to 424,964 10917 mRNA_2550: 10918 - KOG3116 Predicted C3H1-type Zn-finger protein, at 425,175 to 426,192 10918 mRNA_2551: 10919 - K00799 GST, gst glutathione S-transferase, at 426,245 to 427,122 10919 mRNA_2552: 10920 - Hypothetical Protein, at 428,082 to 428,710 10920
Group Condition mRNA_2548 mRNA_2549 mRNA_2550 mRNA_2551 mRNA_2552
10916 10917 10918 10919 10920
facs on lipid accumulation Sorted High BODIPY Gate -0.8 -0.9 -0.3 -1.2 +0.4
auxotrophy Dropout Complete -0.1 -0.8 -0.4 -1.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -1.4 -0.4 -1.1 +0.1
ypd buoyancy 40 hrs No Buoyancy Separation +1.6 +0.1 -2.3 -1.6 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 -0.0 -0.1 -1.4 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.4 -0.5 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -1.2 +0.7 -0.4 -0.8 +0.7
ypd buoyancy 40 hrs Low Buoyancy +0.5 -0.2 +0.1 -1.1 -0.2
auxotrophy YNB Glucose +0.2 -0.7 -0.1 +0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.1 +0.0 -0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy +0.8 -0.2 -0.3 -0.8 +0.0
growth on ricinoleic acid YNB Glucose +0.2 +0.5 -0.2 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 +2.2 -1.0 -0.7 +0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 +0.7 -0.2 -0.3 +0.3
growth on oleic acid YNB Oleic Acid +0.5 -0.4 -0.5 +0.3 +0.4
growth on oleic acid YNB Glucose -0.4 -0.0 +0.0 +0.6 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.7 +0.4 -0.0 -0.4 +0.0
growth on ypd YPD -0.8 +1.0 -0.0 +0.4 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.6 +1.2 -0.1 -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 +0.6 +0.2 +1.2 +0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 +1.0 +0.0 +1.1 +0.6
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