Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10917 and 10918 are separated by 210 nucleotides10918 and 10919 are separated by 52 nucleotides10919 and 10920 are separated by 959 nucleotides10920 and 10921 are separated by 111 nucleotides mRNA_2549: 10917 - HMMPfam-Chromatin modification-related protein EAF7-PF07904, at 423,711 to 424,964 10917 mRNA_2550: 10918 - KOG3116 Predicted C3H1-type Zn-finger protein, at 425,175 to 426,192 10918 mRNA_2551: 10919 - K00799 GST, gst glutathione S-transferase, at 426,245 to 427,122 10919 mRNA_2552: 10920 - Hypothetical Protein, at 428,082 to 428,710 10920 mRNA_2553: 10921 - KOG2466 Uridine permease/thiamine transporter/allantoin transport, at 428,822 to 431,100 10921
Group Condition mRNA_2549 mRNA_2550 mRNA_2551 mRNA_2552 mRNA_2553
10917 10918 10919 10920 10921
ypd buoyancy 40 hrs No Buoyancy Separation +0.1 -2.3 -1.6 -0.4 +0.0
auxotrophy Dropout Complete -0.8 -0.4 -1.2 -0.2 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -1.4 -0.4 -1.1 +0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.3 -1.2 +0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -1.4 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2 +0.1 -1.1 -0.2 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.3 -0.8 +0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.5 -0.0 -0.2 -0.1
auxotrophy YNB Glucose -0.7 -0.1 +0.2 -0.2 -0.1
growth on oleic acid YNB Oleic Acid -0.4 -0.5 +0.3 +0.4 -0.3
auxotrophy YNB Glucose 75mM Methionine -0.1 +0.0 -0.0 -0.3 -0.1
growth on ricinoleic acid YNB Glucose +0.5 -0.2 -0.2 -0.2 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 -0.0 -0.4 +0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.7 -0.2 -0.3 +0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.7 -0.4 -0.8 +0.7 -0.1
growth on oleic acid YNB Glucose -0.0 +0.0 +0.6 +0.1 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid +1.2 -0.1 -0.2 -0.2 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +2.2 -1.0 -0.7 +0.4 -0.0
growth on ypd YPD +1.0 -0.0 +0.4 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 +0.2 +1.2 +0.6 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.0 +0.0 +1.1 +0.6 +0.0
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