Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10919 and 10920 are separated by 959 nucleotides10920 and 10921 are separated by 111 nucleotides10921 and 10922 are separated by 603 nucleotides10922 and 10923 are separated by 102 nucleotides mRNA_2551: 10919 - K00799 GST, gst glutathione S-transferase, at 426,245 to 427,122 10919 mRNA_2552: 10920 - Hypothetical Protein, at 428,082 to 428,710 10920 mRNA_2553: 10921 - KOG2466 Uridine permease/thiamine transporter/allantoin transport, at 428,822 to 431,100 10921 mRNA_2554: 10922 - BLAST Amino acid/polyamine transporter I [Sporothrix insect..., at 431,704 to 432,671 10922 mRNA_2555: 10923 - K12736 PPWD1 peptidylprolyl isomerase domain and WD repeat-containing protein 1, at 432,774 to 435,316 10923
Group Condition mRNA_2551 mRNA_2552 mRNA_2553 mRNA_2554 mRNA_2555
10919 10920 10921 10922 10923
ypd buoyancy 40 hrs No Buoyancy Separation -1.6 -0.4 +0.0 -1.2 N.D.
auxotrophy Dropout Complete -1.2 -0.2 -0.2 -0.7 N.D.
ypd buoyancy 40 hrs Low Buoyancy -1.1 -0.2 -0.2 -0.4 N.D.
facs on lipid accumulation Sorted No BODIPY Gate -1.1 +0.1 -0.0 -0.7 N.D.
ypd buoyancy 40 hrs Median Buoyancy -1.4 -0.1 -0.2 +0.0 N.D.
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 +0.3 -0.3 -1.1 N.D.
ypd buoyancy 40 hrs High Buoyancy -0.8 +0.0 -0.1 -0.6 N.D.
facs on lipid accumulation Sorted High BODIPY Gate -1.2 +0.4 -0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 +0.4 -0.0 -0.7 N.D.
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.3 -0.1 -0.3 N.D.
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.2 -0.1 -0.3 N.D.
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.8 +0.7 -0.1 -0.3 N.D.
growth on ricinoleic acid YNB Glucose -0.2 -0.2 -0.1 -0.1 N.D.
auxotrophy YNB Glucose +0.2 -0.2 -0.1 -0.3 N.D.
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 +0.0 -0.1 +0.0 N.D.
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.2 -0.1 +0.3 N.D.
growth on oleic acid YNB Glucose +0.6 +0.1 -0.3 -0.2 N.D.
growth on oleic acid YNB Oleic Acid +0.3 +0.4 -0.3 -0.1 N.D.
buoyancy on lipid accumulation 40 hrs Median Buoyancy +1.1 +0.6 +0.0 -0.9 N.D.
buoyancy on lipid accumulation 40 hrs Low Buoyancy +1.2 +0.6 -0.1 -0.7 N.D.
growth on ypd YPD +0.4 +0.2 +0.2 +0.8 N.D.
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