Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt 10921 and 10922 are separated by 603 nucleotides10922 and 10923 are separated by 102 nucleotides10923 and 10924 are separated by 276 nucleotides10924 and 10925 are separated by 289 nucleotides mRNA_2553: 10921 - KOG2466 Uridine permease/thiamine transporter/allantoin transport, at 428,822 to 431,100 10921 mRNA_2554: 10922 - BLAST Amino acid/polyamine transporter I [Sporothrix insect..., at 431,704 to 432,671 10922 mRNA_2555: 10923 - K12736 PPWD1 peptidylprolyl isomerase domain and WD repeat-containing protein 1, at 432,774 to 435,316 10923 mRNA_2556: 10924 - Hypothetical Protein, at 435,593 to 437,275 10924 mRNA_2557: 10925 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 437,565 to 439,347 10925
Group Condition mRNA_2553 mRNA_2554 mRNA_2555 mRNA_2556 mRNA_2557
10921 10922 10923 10924 10925
ypd buoyancy 40 hrs No Buoyancy Separation +0.0 -1.2 N.D. -0.3 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -1.1 N.D. +0.4 +0.0
auxotrophy Dropout Complete -0.2 -0.7 N.D. +0.0 -0.1
auxotrophy YNB Glucose -0.1 -0.3 N.D. -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.6 N.D. +0.0 +0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.7 N.D. +0.1 +0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 N.D. -0.1 +0.1
growth on oleic acid YNB Glucose -0.3 -0.2 N.D. -0.0 +0.1
growth on oleic acid YNB Oleic Acid -0.3 -0.1 N.D. -0.0 +0.0
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.4 N.D. +0.0 +0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 -0.7 N.D. +0.4 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3 N.D. -0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.7 N.D. +0.3 +0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.0 -0.9 N.D. +0.3 +0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.3 N.D. +0.4 -0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.1 N.D. +0.2 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.0 N.D. +0.1 +0.2
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 +0.0 N.D. +0.3 +0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.3 N.D. +0.3 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 +0.3 N.D. +0.2 -0.0
growth on ypd YPD +0.2 +0.8 N.D. +0.4 -0.3
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