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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10925 and 10926 are separated by 163 nucleotides
10926 and 10927 are separated by 507 nucleotides
10927 and 10928 are separated by 653 nucleotides
10928 and 10929 are separated by 2425 nucleotides
mRNA_2557: 10925 - KOG2614 Kynurenine 3-monooxygenase and related flavoprotein monooxygenases, at 437,565 to 439,347
10925
mRNA_2558: 10926 - KOG3183 Predicted Zn-finger protein, at 439,511 to 440,693
10926
mRNA_2559: 10927 - HMMPfam-Translin family-PF01997,SUPERFAMILY--SSF74784, at 441,201 to 442,474
10927
mRNA_2560: 10928 - Hypothetical Protein, at 443,128 to 444,142
10928
mRNA_2561: 10929 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 446,568 to 451,968
10929
Group
Condition
mRNA
_2557
mRNA
_2558
mRNA
_2559
mRNA
_2560
mRNA
_2561
10925
10926
10927
10928
10929
facs on lipid accumulation
Sorted Low BODIPY Gate
+0.0
-0.5
-0.1
-1.2
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.7
-0.6
-0.9
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
+0.1
-0.1
-0.5
-0.3
ypd buoyancy
40 hrs Median Buoyancy
+0.2
-0.1
+0.0
-0.6
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
+0.1
-0.0
+0.6
-0.9
-0.3
growth on oleic acid
YNB Oleic Acid
+0.0
-0.4
+0.3
-0.6
+0.2
ypd buoyancy
40 hrs High Buoyancy
+0.1
-0.1
+0.1
-0.3
-0.2
auxotrophy
YNB Glucose 75mM Arginine
+0.2
+0.1
+0.2
-0.5
-0.2
ypd buoyancy
40 hrs Low Buoyancy
+0.2
-0.1
+0.3
-0.8
+0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
+0.5
-0.2
-0.2
-0.2
+0.0
auxotrophy
Dropout Complete
-0.1
+0.1
+0.5
-0.3
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
+0.1
-0.1
-0.0
+0.0
-0.0
growth on ypd
YPD
-0.3
+0.4
+0.1
+0.1
-0.2
auxotrophy
YNB Glucose
-0.1
+0.2
+0.5
-0.6
+0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.0
+0.4
+0.4
-0.5
-0.1
growth on ricinoleic acid
YNB Glucose
-0.0
+0.2
+0.1
+0.1
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.2
+0.1
+0.2
-0.3
+0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
-0.1
+0.0
+0.3
+0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
+0.5
-0.1
-0.0
+0.1
+0.1
auxotrophy
YNB Glucose 75mM Methionine
+0.1
+0.5
+0.5
-0.2
+0.1
growth on oleic acid
YNB Glucose
+0.1
+0.2
+0.4
+0.4
-0.1
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