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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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500 nt
10926 and 10927 are separated by 507 nucleotides
10927 and 10928 are separated by 653 nucleotides
10928 and 10929 are separated by 2425 nucleotides
10929 and 10930 are separated by 250 nucleotides
mRNA_2558: 10926 - KOG3183 Predicted Zn-finger protein, at 439,511 to 440,693
10926
mRNA_2559: 10927 - HMMPfam-Translin family-PF01997,SUPERFAMILY--SSF74784, at 441,201 to 442,474
10927
mRNA_2560: 10928 - Hypothetical Protein, at 443,128 to 444,142
10928
mRNA_2561: 10929 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 446,568 to 451,968
10929
mRNA_2562: 10930 - Hypothetical Protein, at 452,219 to 453,821
10930
Group
Condition
mRNA
_2558
mRNA
_2559
mRNA
_2560
mRNA
_2561
mRNA
_2562
10926
10927
10928
10929
10930
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.1
-1.2
-0.7
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
-0.6
-0.9
-0.0
+0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.1
+0.0
-0.6
-0.2
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.0
+0.6
-0.9
-0.3
+0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
+0.1
-0.1
-0.5
-0.3
+0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
-0.2
-0.2
+0.0
+0.1
growth on oleic acid
YNB Oleic Acid
-0.4
+0.3
-0.6
+0.2
+0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.1
+0.3
-0.8
+0.1
+0.0
ypd buoyancy
40 hrs High Buoyancy
-0.1
+0.1
-0.3
-0.2
+0.1
auxotrophy
YNB Glucose 75mM Arginine
+0.1
+0.2
-0.5
-0.2
+0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.0
+0.0
-0.0
+0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.0
+0.1
+0.1
+0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
+0.4
+0.4
-0.5
-0.1
+0.1
auxotrophy
Dropout Complete
+0.1
+0.5
-0.3
-0.3
+0.2
auxotrophy
YNB Glucose
+0.2
+0.5
-0.6
+0.0
+0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
+0.1
+0.2
-0.3
+0.2
+0.3
growth on ypd
YPD
+0.4
+0.1
+0.1
-0.2
+0.3
growth on ricinoleic acid
YNB Glucose
+0.2
+0.1
+0.1
-0.0
+0.3
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
+0.0
+0.3
+0.2
+0.4
growth on oleic acid
YNB Glucose
+0.2
+0.4
+0.4
-0.1
+0.3
auxotrophy
YNB Glucose 75mM Methionine
+0.5
+0.5
-0.2
+0.1
+0.5
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