Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10933 and 10934 are separated by 691 nucleotides10934 and 10935 are separated by 103 nucleotides10935 and 10936 are separated by 500 nucleotides10936 and 10937 are separated by 598 nucleotides mRNA_2565: 10933 - K00799 GST, gst glutathione S-transferase, at 457,320 to 458,239 10933 mRNA_2566: 10934 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 458,931 to 461,054 10934 mRNA_2567: 10935 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 461,158 to 463,055 10935 mRNA_2568: 10936 - KOG2504 Monocarboxylate transporter, at 463,556 to 465,484 10936 mRNA_2569: 10937 - K07250 gabT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase, at 466,083 to 468,142 10937
Group Condition mRNA_2565 mRNA_2566 mRNA_2567 mRNA_2568 mRNA_2569
10933 10934 10935 10936 10937
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -1.2 -1.0 -0.2 +0.7
growth on oleic acid YNB Glucose -0.2 +0.2 +0.0 -0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.0 -0.1 -0.1 +0.1 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 +0.2 +0.2 +0.2 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 +0.3 +0.1 -0.5 +0.1
growth on ypd YPD -0.6 +0.1 +0.0 +0.3 -0.3
auxotrophy Dropout Complete +0.1 +0.2 +0.3 -0.5 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.3 +0.0 +0.1 -0.1 +0.1
growth on oleic acid YNB Oleic Acid -0.0 -0.0 +0.5 -0.2 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.3 +0.4 +0.1 -0.0 -0.2
auxotrophy YNB Glucose -0.0 +0.1 +0.3 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.0 -0.0 +0.3 -0.2 +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 +0.2 +0.2 +0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3 +0.2 +0.1 +0.1 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.1 +0.3 +0.2 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 +0.6 +0.5 -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.1 +0.1 +0.2 -0.0 +0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 +0.3 +0.0 +0.1 +0.4
growth on ricinoleic acid YNB Glucose -0.4 +0.9 +0.3 -0.5 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.2 +0.3 -0.0 +0.3 +0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 +1.3 +0.8 +0.0 +0.3
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