Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10935 and 10936 are separated by 500 nucleotides10936 and 10937 are separated by 598 nucleotides10937 and 10938 are separated by 186 nucleotides10938 and 10939 are separated by 185 nucleotides mRNA_2567: 10935 - BLAST proteophosphoglycan 5 [Moniliophthora roreri MCA ..., at 461,158 to 463,055 10935 mRNA_2568: 10936 - KOG2504 Monocarboxylate transporter, at 463,556 to 465,484 10936 mRNA_2569: 10937 - K07250 gabT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase, at 466,083 to 468,142 10937 mRNA_2570: 10938 - SUPERFAMILY--SSF52266, at 468,329 to 470,280 10938 mRNA_2571: 10939 - HMMPfam-Methyltransferase domain-PF13679, at 470,466 to 472,507 10939
Group Condition mRNA_2567 mRNA_2568 mRNA_2569 mRNA_2570 mRNA_2571
10935 10936 10937 10938 10939
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.2 +0.7 +0.4 -1.7
growth on oleic acid YNB Glucose +0.0 -0.3 -0.4 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.5 +0.1 -0.2 +0.1
auxotrophy Dropout Complete +0.3 -0.5 -0.5 +0.1 +0.1
growth on ricinoleic acid YNB Methylricinoleic Acid +0.5 -0.2 -0.2 -0.5 +0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1 +0.1 -0.6 -0.1 +0.3
growth on oleic acid YNB Oleic Acid +0.5 -0.2 -0.3 -0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate +0.2 +0.2 -0.8 +0.3 +0.1
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.0 -0.2 -0.1 +0.2
auxotrophy YNB Glucose 75mM Methionine +0.2 -0.0 +0.0 +0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.1 +0.1 +0.2 -0.0
ypd buoyancy 40 hrs Low Buoyancy +0.1 +0.1 +0.2 +0.0 -0.2
auxotrophy YNB Glucose +0.3 -0.1 -0.2 +0.4 +0.0
growth on ricinoleic acid YNB Glucose +0.3 -0.5 +0.3 -0.1 +0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.2 +0.1 -0.1 +0.2 -0.1
growth on ypd YPD +0.0 +0.3 -0.3 +0.1 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.3 -0.2 +0.1 +0.2 +0.1
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.3 +0.3 +0.2 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid +0.8 +0.0 +0.3 -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.0 +0.1 +0.4 +0.1 +0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.2 +0.1 +0.3 -0.0
remove
mRNA_2567
plot
remove
mRNA_2568
plot
remove
mRNA_2569
remove
mRNA_2570
plot
remove
mRNA_2571
plot