Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10937 and 10938 are separated by 186 nucleotides10938 and 10939 are separated by 185 nucleotides10939 and 10940 overlap by 32 nucleotides10940 and 10941 are separated by 196 nucleotides mRNA_2569: 10937 - K07250 gabT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase, at 466,083 to 468,142 10937 mRNA_2570: 10938 - SUPERFAMILY--SSF52266, at 468,329 to 470,280 10938 mRNA_2571: 10939 - HMMPfam-Methyltransferase domain-PF13679, at 470,466 to 472,507 10939 mRNA_2572: 10940 - K13093 HTATSF1 HIV Tat-specific factor 1, at 472,476 to 474,035 10940 mRNA_2573: 10941 - K03848 ALG6 alpha-1,3-glucosyltransferase, at 474,232 to 477,732 10941
Group Condition mRNA_2569 mRNA_2570 mRNA_2571 mRNA_2572 mRNA_2573
10937 10938 10939 10940 10941
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.5 +0.0 N.D. -0.1
ypd buoyancy 40 hrs No Buoyancy Separation +0.7 +0.4 -1.7 N.D. -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 +0.3 +0.1 N.D. -0.2
growth on oleic acid YNB Glucose -0.4 -0.1 -0.1 N.D. +0.0
growth on oleic acid YNB Oleic Acid -0.3 -0.2 -0.1 N.D. -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.6 -0.1 +0.3 N.D. +0.0
auxotrophy Dropout Complete -0.5 +0.1 +0.1 N.D. -0.1
ypd buoyancy 40 hrs Low Buoyancy +0.2 +0.0 -0.2 N.D. -0.2
growth on ricinoleic acid YNB Ricinoleic Acid +0.3 -0.3 +0.1 N.D. -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.1 +0.2 N.D. -0.0
auxotrophy YNB Glucose 75mM Methionine +0.0 +0.1 -0.1 N.D. -0.1
growth on ypd YPD -0.3 +0.1 +0.4 N.D. -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.1 -0.2 +0.1 N.D. +0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 +0.2 -0.1 N.D. +0.1
auxotrophy YNB Glucose -0.2 +0.4 +0.0 N.D. -0.0
auxotrophy YNB Glucose 75mM Arginine +0.1 +0.2 -0.0 N.D. -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.1 +0.2 +0.1 N.D. -0.1
ypd buoyancy 40 hrs High Buoyancy +0.3 +0.2 -0.0 N.D. -0.1
growth on ricinoleic acid YNB Glucose +0.3 -0.1 +0.3 N.D. -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.1 +0.3 -0.0 N.D. +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.4 +0.1 +0.3 N.D. -0.1
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