Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10942 and 10943 are separated by 131 nucleotides10943 and 10944 are separated by 72 nucleotides10944 and 10945 are separated by 153 nucleotides10945 and 10946 are separated by 460 nucleotides mRNA_2574: 10942 - K10158 B3GAT3 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3, at 477,863 to 478,879 10942 mRNA_2575: 10943 - KOG1022 Acetylglucosaminyltransferase EXT2/exostosin 2, at 479,011 to 480,812 10943 mRNA_2576: 10944 - Hypothetical Protein, at 480,885 to 482,213 10944 mRNA_2577: 10945 - HMMPfam-Protein of unknown function (DUF3767)-PF12597, at 482,367 to 483,175 10945 mRNA_2578: 10946 - KOG3574 Acetyl-CoA transporter, at 483,636 to 486,060 10946
Group Condition mRNA_2574 mRNA_2575 mRNA_2576 mRNA_2577 mRNA_2578
10942 10943 10944 10945 10946
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 +0.2 -0.5 +0.6 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -1.2 -0.3 +0.0 +0.4 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.9 -0.7 -0.0 +0.5 +0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.2 -0.3 +0.3 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 -0.4 -0.3 +0.8 -0.2
auxotrophy Dropout Complete -0.5 +0.1 -0.2 +0.4 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid +0.2 -0.0 +0.1 -1.5 +0.9
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.2 -0.0 -0.1 +0.0
growth on oleic acid YNB Oleic Acid -0.3 +0.0 -0.2 -0.2 +0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.2 -0.2 +0.1 +0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 +0.1 +0.1 -0.0 +0.1
growth on ricinoleic acid YNB Ricinoleic Acid +0.4 +0.2 +0.4 -1.6 +1.0
growth on ypd YPD -0.2 -0.2 +0.0 +0.7 +0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 -0.4 -0.1 +1.1 +0.2
facs on lipid accumulation Sorted High BODIPY Gate +0.1 -0.1 +0.2 +0.1 +0.4
growth on oleic acid YNB Glucose +0.2 +0.1 -0.3 +0.4 +0.3
ypd buoyancy 40 hrs Median Buoyancy +0.2 +0.2 +0.1 -0.0 +0.1
growth on ricinoleic acid YNB Glucose +0.1 +0.2 +0.2 -0.4 +0.7
auxotrophy YNB Glucose -0.1 -0.1 +0.3 +0.3 +0.4
auxotrophy YNB Glucose 75mM Methionine +0.0 -0.0 +0.1 +0.4 +0.4
ypd buoyancy 40 hrs Low Buoyancy +0.4 +0.2 +0.2 +0.3 +0.3
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