Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments or choose conditions or try the comparative fitness browser

500 nt 10946 and 10947 are separated by 134 nucleotides10947 and 10948 are separated by 99 nucleotides10948 and 10949 are separated by 593 nucleotides10949 and 10950 are separated by 48 nucleotides mRNA_2578: 10946 - KOG3574 Acetyl-CoA transporter, at 483,636 to 486,060 10946 mRNA_2579: 10947 - K10597 UBE4B, UFD2 ubiquitin conjugation factor E4 B, at 486,195 to 490,612 10947 mRNA_2580: 10948 - SUPERFAMILY--SSF52266, at 490,712 to 492,348 10948 mRNA_2581: 10949 - K06096 VAPA vesicle-associated membrane protein-associated protein A, at 492,942 to 494,422 10949 mRNA_2582: 10950 - HMMPfam-Ribosomal protein L35-PF01632,PRINTS-Ribosomal protein L35 signature-PR00064,ProSitePatterns-Ribosomal protein L35 signature.-PS00936,SUPERFAMILY--SSF143034, at 494,471 to 495,097 10950
Group Condition mRNA_2578 mRNA_2579 mRNA_2580 mRNA_2581 mRNA_2582
10946 10947 10948 10949 10950
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -1.1 -0.1 -0.4 -0.2
auxotrophy Dropout Complete -0.0 -1.1 -0.1 -0.5 +0.0
auxotrophy YNB Glucose 75mM Arginine +0.0 -0.9 +0.1 -0.7 +0.1
growth on oleic acid YNB Oleic Acid +0.5 -0.9 -0.3 -0.1 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid +1.0 -1.2 +0.2 -0.1 -1.1
growth on oleic acid YNB Glucose +0.3 -0.9 +0.0 -0.4 -0.1
facs on lipid accumulation Sorted No BODIPY Gate +0.0 -0.8 +0.2 -0.4 -0.0
growth on ricinoleic acid YNB Glucose +0.7 -1.2 +0.1 -0.3 -0.2
auxotrophy YNB Glucose 75mM Methionine +0.4 -1.0 -0.1 -0.4 +0.3
ypd buoyancy 40 hrs Low Buoyancy +0.3 -0.3 -0.0 -0.4 -0.3
auxotrophy YNB Glucose +0.4 -1.3 -0.0 -0.3 +0.5
growth on ricinoleic acid YNB Methylricinoleic Acid +0.9 -1.0 +0.1 -0.1 -0.6
growth on ypd YPD +0.3 -0.1 +0.2 -0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.1 +0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 +0.0 -0.2 +0.2 +0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy +0.2 -0.4 -0.1 +0.4 +0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.5 +0.1 +0.4 +0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.3 +0.6 -0.1 -0.6 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 +0.4 +0.2 +0.2 +0.3
facs on lipid accumulation Sorted High BODIPY Gate +0.4 -0.1 -0.2 +0.4 +0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 +0.1 -0.1 +0.2 +0.1
remove
mRNA_2578
plot
remove
mRNA_2579
plot
remove
mRNA_2580
remove
mRNA_2581
plot
remove
mRNA_2582
plot