Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10947 and 10948 are separated by 99 nucleotides10948 and 10949 are separated by 593 nucleotides10949 and 10950 are separated by 48 nucleotides10950 and 10951 are separated by 102 nucleotides mRNA_2579: 10947 - K10597 UBE4B, UFD2 ubiquitin conjugation factor E4 B, at 486,195 to 490,612 10947 mRNA_2580: 10948 - SUPERFAMILY--SSF52266, at 490,712 to 492,348 10948 mRNA_2581: 10949 - K06096 VAPA vesicle-associated membrane protein-associated protein A, at 492,942 to 494,422 10949 mRNA_2582: 10950 - HMMPfam-Ribosomal protein L35-PF01632,PRINTS-Ribosomal protein L35 signature-PR00064,ProSitePatterns-Ribosomal protein L35 signature.-PS00936,SUPERFAMILY--SSF143034, at 494,471 to 495,097 10950 mRNA_2583: 10951 - K10610 DDB1 DNA damage-binding protein 1, at 495,200 to 499,404 10951
Group Condition mRNA_2579 mRNA_2580 mRNA_2581 mRNA_2582 mRNA_2583
10947 10948 10949 10950 10951
growth on ricinoleic acid YNB Ricinoleic Acid -1.2 +0.2 -0.1 -1.1 -0.8
auxotrophy Dropout Complete -1.1 -0.1 -0.5 +0.0 -0.6
growth on oleic acid YNB Oleic Acid -0.9 -0.3 -0.1 -0.6 -0.4
facs on lipid accumulation Sorted Low BODIPY Gate -1.1 -0.1 -0.4 -0.2 -0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 +0.1 -0.1 -0.6 -0.6
growth on ricinoleic acid YNB Glucose -1.2 +0.1 -0.3 -0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.9 +0.1 -0.7 +0.1 -0.3
growth on oleic acid YNB Glucose -0.9 +0.0 -0.4 -0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.3 -0.0 -0.4 -0.3 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.8 +0.2 -0.4 -0.0 -0.4
auxotrophy YNB Glucose 75mM Methionine -1.0 -0.1 -0.4 +0.3 -0.2
auxotrophy YNB Glucose -1.3 -0.0 -0.3 +0.5 -0.3
growth on ypd YPD -0.1 +0.2 -0.3 -0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 +0.4 +0.4 -0.4
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 +0.1 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy +0.1 -0.1 +0.2 +0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.2 +0.4 +0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation +0.0 -0.2 +0.2 +0.2 +0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5 +0.1 +0.4 +0.6 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy +0.6 -0.1 -0.6 +0.2 +0.2
ypd buoyancy 40 hrs No Buoyancy Separation +0.4 +0.2 +0.2 +0.3 +0.0
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