Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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500 nt 10948 and 10949 are separated by 593 nucleotides10949 and 10950 are separated by 48 nucleotides10950 and 10951 are separated by 102 nucleotides10951 and 10952 are separated by 239 nucleotides mRNA_2580: 10948 - SUPERFAMILY--SSF52266, at 490,712 to 492,348 10948 mRNA_2581: 10949 - K06096 VAPA vesicle-associated membrane protein-associated protein A, at 492,942 to 494,422 10949 mRNA_2582: 10950 - HMMPfam-Ribosomal protein L35-PF01632,PRINTS-Ribosomal protein L35 signature-PR00064,ProSitePatterns-Ribosomal protein L35 signature.-PS00936,SUPERFAMILY--SSF143034, at 494,471 to 495,097 10950 mRNA_2583: 10951 - K10610 DDB1 DNA damage-binding protein 1, at 495,200 to 499,404 10951 mRNA_2584: 10952 - K12350 SMPD1, ASM sphingomyelin phosphodiesterase, at 499,644 to 502,553 10952
Group Condition mRNA_2580 mRNA_2581 mRNA_2582 mRNA_2583 mRNA_2584
10948 10949 10950 10951 10952
growth on ricinoleic acid YNB Ricinoleic Acid +0.2 -0.1 -1.1 -0.8 +0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.4 -0.3 -0.4 -0.0
growth on oleic acid YNB Oleic Acid -0.3 -0.1 -0.6 -0.4 +0.2
auxotrophy Dropout Complete -0.1 -0.5 +0.0 -0.6 +0.2
growth on ricinoleic acid YNB Methylricinoleic Acid +0.1 -0.1 -0.6 -0.6 +0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.4 -0.2 -0.3 +0.3
auxotrophy YNB Glucose 75mM Arginine +0.1 -0.7 +0.1 -0.3 +0.2
growth on oleic acid YNB Glucose +0.0 -0.4 -0.1 -0.2 +0.2
facs on lipid accumulation Sorted No BODIPY Gate +0.2 -0.4 -0.0 -0.4 +0.1
growth on ricinoleic acid YNB Glucose +0.1 -0.3 -0.2 -0.3 +0.1
ypd buoyancy 40 hrs Median Buoyancy +0.1 +0.1 -0.2 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 +0.2 +0.1 -0.3 -0.0
growth on ypd YPD +0.2 -0.3 -0.1 -0.0 +0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.6 +0.2 +0.2 +0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.2 +0.4 +0.1 -0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.4 +0.3 -0.2 +0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 +0.4 +0.4 -0.4 -0.1
auxotrophy YNB Glucose -0.0 -0.3 +0.5 -0.3 +0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 +0.2 +0.2 +0.0 +0.3
ypd buoyancy 40 hrs No Buoyancy Separation +0.2 +0.2 +0.3 +0.0 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy +0.1 +0.4 +0.6 -0.3 -0.1
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